Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL352979.3-201ENST00000553515 247 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC106782.4-201ENST00000568264 210 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 MIR3138-201ENST00000585238 82 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC013553.2-201ENST00000604244 589 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL590392.1-201ENST00000604960 446 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC023043.4-201ENST00000612081 449 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL021997.2-201ENST00000615674 271 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 C2orf27A-204ENST00000623058 969 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC112487.2-201ENST00000637950 304 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 USP8P1-201ENST00000494673 3183 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 NOL8P1-201ENST00000508336 3529 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 UBE2L2-201ENST00000254302 429 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 MIR383-201ENST00000362257 73 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 SNORA31-201ENST00000362607 130 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 Y_RNA.100-201ENST00000363141 102 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 Y_RNA.166-201ENST00000363730 102 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNU6-694P-201ENST00000364071 147 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNU1-132P-201ENST00000364300 164 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNA5SP366-201ENST00000365454 123 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 Y_RNA.529-201ENST00000384586 119 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 MT-TD-201ENST00000387419 68 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNU6-510P-201ENST00000391239 108 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL356432.1-201ENST00000405809 419 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 SNORA74C-2-201ENST00000411179 201 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC080125.1-201ENST00000414888 684 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 BX842559.1-201ENST00000419615 532 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 EIF4EP1-201ENST00000422311 642 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 MTCO3P46-201ENST00000425787 232 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL451062.2-201ENST00000427515 271 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 IFNA20P-201ENST00000436840 528 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 HMGB3P11-201ENST00000440127 604 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 PRPS1P1-201ENST00000445305 876 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 NUTF2P3-201ENST00000448540 384 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 TRBV1-201ENST00000476502 284 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 RPL31P60-201ENST00000478450 367 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC105137.1-201ENST00000484355 562 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 Y_RNA.654-201ENST00000497848 106 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC023141.12-201ENST00000512399 199 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNU7-30P-201ENST00000516835 62 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNA5SP471-201ENST00000516971 106 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 MRPL49P2-201ENST00000521066 465 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 TRAV8-5-201ENST00000537369 341 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 SCOCP1-201ENST00000554676 349 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC092747.3-201ENST00000603769 301 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC106900.2-201ENST00000604994 317 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC010201.1-201ENST00000605051 540 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 CTHRC1P1-201ENST00000605383 469 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 MIR15A-201ENST00000607334 83 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC009570.1-201ENST00000609599 745 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 DUSP12P1-201ENST00000612874 516 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC034102.8-201ENST00000615146 484 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC007546.1-201ENST00000619452 559 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AP003400.5-201ENST00000624827 617 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 MIR3653-201ENST00000625572 110 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 HSPA8P4-201ENST00000511877 1920 ntBASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
IGHV4-28A0A0C4DH34 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms