Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC073063.1-201ENST00000434352 607 ntBASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 AL353572.1-201ENST00000442490 417 ntBASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 RAC1P7-201ENST00000445367 377 ntBASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 NDUFS5P3-201ENST00000450668 321 ntBASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 AC234775.1-201ENST00000454247 670 ntBASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 AC108059.3-201ENST00000456388 214 ntBASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 SNORD105B-201ENST00000458770 79 ntBASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 SNORD121B-201ENST00000458838 81 ntBASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 RPL31P58-201ENST00000469001 379 ntBASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 RPS3AP14-201ENST00000483907 780 ntBASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 AC055855.1-201ENST00000489563 579 ntBASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 AC114967.1-201ENST00000504890 259 ntBASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 AC010486.1-201ENST00000511793 424 ntBASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 SNORA70.18-201ENST00000516696 98 ntBASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 RNU6-579P-201ENST00000516879 102 ntBASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 SETP7-201ENST00000552169 453 ntBASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 LARP7P3-201ENST00000579888 337 ntBASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 COX6CP3-201ENST00000580869 223 ntBASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 MIR3118-1-201ENST00000581787 76 ntBASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 UBE2L4-201ENST00000587688 464 ntBASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 AC012507.3-201ENST00000603556 477 ntBASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 AC004908.2-201ENST00000609090 574 ntBASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 AC002550.2-201ENST00000621246 394 ntBASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 AL158801.5-201ENST00000623123 465 ntBASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 AL356489.2-201ENST00000566968 3528 ntBASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RAI2Q9Y5P3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 CEP170P1-201ENST00000502249 4587 ntBASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 RNA5SP42-201ENST00000364278 115 ntBASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 RNU6-283P-201ENST00000364788 107 ntBASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 Y_RNA.453-201ENST00000384223 109 ntBASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 RNU6-837P-201ENST00000391056 108 ntBASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 AL391417.1-201ENST00000404100 426 ntBASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 CIR1P3-201ENST00000405137 479 ntBASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 RNU2-62P-201ENST00000410868 191 ntBASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 AC003071.1-201ENST00000451219 789 ntBASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 ANP32BP2-201ENST00000454525 545 ntBASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 AC013267.1-201ENST00000458227 267 ntBASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 MTCO2P29-201ENST00000465212 189 ntBASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 AL121769.1-201ENST00000469473 401 ntBASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 AC009646.1-201ENST00000510455 318 ntBASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 AC105914.1-201ENST00000511798 226 ntBASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 HMGN1P28-201ENST00000521340 364 ntBASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 AC107934.1-201ENST00000522215 217 ntBASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 CR383656.7-201ENST00000548164 174 ntBASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 SUB1P2-201ENST00000556401 297 ntBASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 OR6R2P-201ENST00000609216 300 ntBASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 U6.42-201ENST00000618440 107 ntBASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 AC012150.2-201ENST00000621300 544 ntBASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 AL356321.1-201ENST00000621360 228 ntBASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 AC073073.2-201ENST00000609827 2578 ntBASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 AC090229.1-201ENST00000590983 1609 ntBASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
RAI2Q9Y5P3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
RAI2Q9Y5P3 NMD3P1-201ENST00000439704 1488 ntBASIC3.6□□□□□ -1.83
RAI2Q9Y5P3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.6□□□□□ -1.83
RAI2Q9Y5P3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RAI2Q9Y5P3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms