Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.19□□□□□ -1.58
HRH3Q9Y5N1 AC008121.1-201ENST00000603244 268 ntBASIC5.19□□□□□ -1.58
HRH3Q9Y5N1 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.19□□□□□ -1.58
HRH3Q9Y5N1 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HRH3Q9Y5N1 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HRH3Q9Y5N1 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HRH3Q9Y5N1 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.19□□□□□ -1.58
HRH3Q9Y5N1 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 RNU5A-1-201ENST00000362698 116 ntBASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 Y_RNA.304-201ENST00000365011 112 ntBASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 RNU6-937P-201ENST00000384325 106 ntBASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 RNU6-171P-201ENST00000384354 107 ntBASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 RNU6-178P-201ENST00000384631 104 ntBASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 RNU2-20P-201ENST00000410425 191 ntBASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 AC099670.2-201ENST00000435130 321 ntBASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 AC079354.2-201ENST00000453523 154 ntBASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 AC034236.1-201ENST00000469891 373 ntBASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 RN7SL570P-201ENST00000484405 292 ntBASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 RNU6-513P-201ENST00000516104 104 ntBASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 AC025884.1-201ENST00000556034 378 ntBASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 AL049872.1-201ENST00000556323 322 ntBASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 AL139395.1-201ENST00000603662 160 ntBASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 AC021753.1-201ENST00000635724 168 ntBASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
HRH3Q9Y5N1 PCAT14-202ENST00000627127 3935 ntBASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 AC104260.2-201ENST00000623551 3497 ntBASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 RNU6-227P-201ENST00000362865 103 ntBASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 RNU6-1167P-201ENST00000363227 94 ntBASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 RNA5SP131-201ENST00000365452 119 ntBASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 AC017079.2-201ENST00000416102 485 ntBASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 CRIP1P1-201ENST00000427567 185 ntBASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 RNU1-88P-201ENST00000459274 128 ntBASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 RNA5SP228-201ENST00000516232 133 ntBASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 RNA5SP34-201ENST00000516887 130 ntBASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 RNA5SP230-201ENST00000517039 122 ntBASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 AP006245.1-201ENST00000522549 120 ntBASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 IGBP1P1-201ENST00000554337 1009 ntBASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 AC023824.2-201ENST00000566185 400 ntBASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 MIR4659A-201ENST00000580269 81 ntBASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 MIR4260-201ENST00000583107 67 ntBASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 AL161629.2-201ENST00000615347 275 ntBASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 SDAD1P2-201ENST00000441308 2028 ntBASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 AC083899.1-201ENST00000454465 3819 ntBASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
HRH3Q9Y5N1 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 Y_RNA.76-201ENST00000362931 109 ntBASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 U3.6-201ENST00000363622 211 ntBASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 Y_RNA.170-201ENST00000363746 110 ntBASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 U3.10-201ENST00000364459 214 ntBASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 GLULP6-201ENST00000399502 913 ntBASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 AL117339.3-201ENST00000418733 162 ntBASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms