Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 RPL7P26-201ENST00000333817 754 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 Y_RNA.157-201ENST00000363638 102 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 RNA5SP387-201ENST00000364226 106 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 PTMAP2-201ENST00000397627 327 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 AL136116.1-201ENST00000403591 381 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 LAP3P1-201ENST00000403648 294 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 AL356776.1-201ENST00000406574 447 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 RNU6-1068P-201ENST00000410958 103 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 AL513185.2-201ENST00000425543 193 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 MTATP6P4-201ENST00000427725 675 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 RPS6P12-201ENST00000432491 726 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 HMGN2P21-201ENST00000447764 270 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 RPS24P6-201ENST00000452670 400 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 snoU13.24-201ENST00000458998 104 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 RPS20P20-201ENST00000460498 340 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 RPL7L1P8-201ENST00000469911 741 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 AC010285.1-201ENST00000470580 392 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 RPL23AP55-201ENST00000498163 452 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 AC139783.2-201ENST00000504847 1145 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 GMPSP1-201ENST00000514075 579 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 RNA5SP503-201ENST00000517047 117 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 ERHP1-201ENST00000523006 310 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 CENPUP1-201ENST00000526649 1202 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 RPL23AP84-201ENST00000571193 464 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 FAM60BP-201ENST00000578364 658 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 AC010928.3-201ENST00000587712 541 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 AC174048.1-201ENST00000603389 144 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 AL035413.2-201ENST00000604801 525 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 AC010133.1-201ENST00000615809 842 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 AC007742.2-201ENST00000618226 398 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 AC006504.8-201ENST00000621046 635 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 AC007998.5-201ENST00000622938 237 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 SDAD1P2-201ENST00000441308 2028 ntBASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.14□□□□□ -1.75
PCDHB1Q9Y5F3 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 RIOK3P1-201ENST00000418778 1528 ntBASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 SNORA71.3-201ENST00000362582 128 ntBASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 RNU6-188P-201ENST00000364207 107 ntBASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 AL160275.2-201ENST00000412010 394 ntBASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 AC245054.1-201ENST00000420944 258 ntBASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 DUTP6-201ENST00000425573 462 ntBASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 MTND1P14-201ENST00000427400 950 ntBASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 GAPDHP27-201ENST00000447427 1020 ntBASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 AC133473.1-201ENST00000455173 299 ntBASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 RNA5SP246-201ENST00000458909 119 ntBASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 AC110792.1-201ENST00000491826 472 ntBASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 AC099522.1-202ENST00000514718 367 ntBASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 LRRC34P2-201ENST00000514850 553 ntBASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 RNA5SP154-201ENST00000516193 111 ntBASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 Vault.1-201ENST00000516474 102 ntBASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 SNORA31.22-201ENST00000517204 135 ntBASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 AC008489.1-201ENST00000524271 483 ntBASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 GLYCAM1-201ENST00000546596 285 ntBASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 RMST_3.1-201ENST00000611651 109 ntBASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 AC004696.1-201ENST00000614345 607 ntBASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 MIR6075-201ENST00000620782 95 ntBASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 AC025034.2-201ENST00000623264 286 ntBASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 AC099654.5-201ENST00000636479 350 ntBASIC4.13□□□□□ -1.75
PCDHB1Q9Y5F3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms