Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.91□□□□□ -1.94
ATG4BQ9Y4P1 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.91□□□□□ -1.94
ATG4BQ9Y4P1 AC005000.2-201ENST00000605468 310 ntBASIC2.91□□□□□ -1.94
ATG4BQ9Y4P1 AC092192.1-201ENST00000633154 1018 ntBASIC2.91□□□□□ -1.94
ATG4BQ9Y4P1 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.91□□□□□ -1.94
ATG4BQ9Y4P1 FAM35BP-202ENST00000497389 3337 ntBASIC2.91□□□□□ -1.94
ATG4BQ9Y4P1 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.91□□□□□ -1.94
ATG4BQ9Y4P1 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.9□□□□□ -1.94
ATG4BQ9Y4P1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
ATG4BQ9Y4P1 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
ATG4BQ9Y4P1 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
ATG4BQ9Y4P1 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
ATG4BQ9Y4P1 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
ATG4BQ9Y4P1 MIR148B-201ENST00000362252 99 ntBASIC2.9□□□□□ -1.95
ATG4BQ9Y4P1 AL359704.1-201ENST00000411586 781 ntBASIC2.9□□□□□ -1.95
ATG4BQ9Y4P1 MRPL50P2-201ENST00000416821 482 ntBASIC2.9□□□□□ -1.95
ATG4BQ9Y4P1 SDCBPP3-201ENST00000419629 891 ntBASIC2.9□□□□□ -1.95
ATG4BQ9Y4P1 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.9□□□□□ -1.95
ATG4BQ9Y4P1 FAM103A2P-201ENST00000444122 354 ntBASIC2.9□□□□□ -1.95
ATG4BQ9Y4P1 AL671855.1-201ENST00000446875 1203 ntBASIC2.9□□□□□ -1.95
ATG4BQ9Y4P1 RN7SL20P-201ENST00000488827 297 ntBASIC2.9□□□□□ -1.95
ATG4BQ9Y4P1 RNA5SP385-201ENST00000515947 110 ntBASIC2.9□□□□□ -1.95
ATG4BQ9Y4P1 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
ATG4BQ9Y4P1 MTATP6P15-201ENST00000527233 835 ntBASIC2.9□□□□□ -1.95
ATG4BQ9Y4P1 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.9□□□□□ -1.95
ATG4BQ9Y4P1 DNAJC8P1-201ENST00000554535 372 ntBASIC2.9□□□□□ -1.95
ATG4BQ9Y4P1 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.9□□□□□ -1.95
ATG4BQ9Y4P1 AMZ2P1-203ENST00000565833 850 ntBASIC2.9□□□□□ -1.95
ATG4BQ9Y4P1 HMGB1P6-201ENST00000569046 646 ntBASIC2.9□□□□□ -1.95
ATG4BQ9Y4P1 AC005951.1-201ENST00000576706 485 ntBASIC2.9□□□□□ -1.95
ATG4BQ9Y4P1 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.9□□□□□ -1.95
ATG4BQ9Y4P1 MIR4325-201ENST00000583049 90 ntBASIC2.9□□□□□ -1.95
ATG4BQ9Y4P1 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
ATG4BQ9Y4P1 GLUD1P4-201ENST00000590914 418 ntBASIC2.9□□□□□ -1.95
ATG4BQ9Y4P1 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.9□□□□□ -1.95
ATG4BQ9Y4P1 AC093838.1-201ENST00000613014 469 ntBASIC2.9□□□□□ -1.95
ATG4BQ9Y4P1 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.9□□□□□ -1.95
ATG4BQ9Y4P1 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.9□□□□□ -1.95
ATG4BQ9Y4P1 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
ATG4BQ9Y4P1 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 AL353743.1-202ENST00000431724 1695 ntBASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 AC092125.1-201ENST00000562568 1995 ntBASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 RNU6-525P-201ENST00000363685 104 ntBASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 SNORA46-201ENST00000384762 135 ntBASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 MIR23A-201ENST00000385245 73 ntBASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 SNORA48.2-201ENST00000390926 124 ntBASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 SNORA48.5-201ENST00000391143 135 ntBASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 SAR1AP2-201ENST00000392696 594 ntBASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 RPL7P25-201ENST00000404151 721 ntBASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 RN7SKP123-201ENST00000410732 291 ntBASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 RPL7L1P10-201ENST00000427790 463 ntBASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 MTCYBP39-201ENST00000437562 491 ntBASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 RPL27AP5-201ENST00000469428 449 ntBASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 RPS26P21-201ENST00000475397 348 ntBASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 AC006483.1-201ENST00000487308 313 ntBASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 AL049874.1-201ENST00000489560 388 ntBASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 AC245166.1-201ENST00000521012 253 ntBASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 AC008015.1-201ENST00000555505 465 ntBASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 UBE2L4-201ENST00000587688 464 ntBASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 AC008751.2-201ENST00000597885 980 ntBASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 AC079089.3-201ENST00000603094 673 ntBASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 AL603758.1-201ENST00000618654 241 ntBASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 AL158801.5-201ENST00000623123 465 ntBASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 AL356266.1-201ENST00000623311 483 ntBASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 AC112204.3-201ENST00000623822 332 ntBASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 AC019226.1-201ENST00000625666 515 ntBASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 AC008264.2-201ENST00000610193 3731 ntBASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 ZNF833P-201ENST00000424938 1494 ntBASIC2.89□□□□□ -1.95
ATG4BQ9Y4P1 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 AC073325.2-201ENST00000339545 159 ntBASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 RNU6-799P-201ENST00000363567 107 ntBASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 SNORA54-201ENST00000384281 123 ntBASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 RNU6-769P-201ENST00000384407 104 ntBASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 MIR128-1-201ENST00000384921 82 ntBASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 Z92545.1-201ENST00000411782 234 ntBASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms