Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.55□□□□□ -1.52
NOD1Q9Y239 SNORA2.3-201ENST00000383920 135 ntBASIC5.55□□□□□ -1.52
NOD1Q9Y239 MT-TW-201ENST00000387382 68 ntBASIC5.55□□□□□ -1.52
NOD1Q9Y239 MIR548I3-201ENST00000408378 149 ntBASIC5.55□□□□□ -1.52
NOD1Q9Y239 MIR548I1-201ENST00000408810 149 ntBASIC5.55□□□□□ -1.52
NOD1Q9Y239 RNU6-325P-201ENST00000411132 105 ntBASIC5.55□□□□□ -1.52
NOD1Q9Y239 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC5.55□□□□□ -1.52
NOD1Q9Y239 RBMY1KP-201ENST00000423480 476 ntBASIC5.55□□□□□ -1.52
NOD1Q9Y239 AC006946.1-201ENST00000429106 328 ntBASIC5.55□□□□□ -1.52
NOD1Q9Y239 BX323845.1-201ENST00000432417 179 ntBASIC5.55□□□□□ -1.52
NOD1Q9Y239 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.55□□□□□ -1.52
NOD1Q9Y239 PTMAP3-201ENST00000447474 330 ntBASIC5.55□□□□□ -1.52
NOD1Q9Y239 OR2AQ1P-201ENST00000451972 200 ntBASIC5.55□□□□□ -1.52
NOD1Q9Y239 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.55□□□□□ -1.52
NOD1Q9Y239 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.55□□□□□ -1.52
NOD1Q9Y239 AC113155.1-201ENST00000511141 769 ntBASIC5.55□□□□□ -1.52
NOD1Q9Y239 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC5.55□□□□□ -1.52
NOD1Q9Y239 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC5.55□□□□□ -1.52
NOD1Q9Y239 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.55□□□□□ -1.52
NOD1Q9Y239 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
NOD1Q9Y239 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.55□□□□□ -1.52
NOD1Q9Y239 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.55□□□□□ -1.52
NOD1Q9Y239 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.55□□□□□ -1.52
NOD1Q9Y239 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.55□□□□□ -1.52
NOD1Q9Y239 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NOD1Q9Y239 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NOD1Q9Y239 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NOD1Q9Y239 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
NOD1Q9Y239 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NOD1Q9Y239 ASNSP1-201ENST00000518311 1939 ntBASIC5.54□□□□□ -1.52
NOD1Q9Y239 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
NOD1Q9Y239 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NOD1Q9Y239 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.54□□□□□ -1.52
NOD1Q9Y239 RNU6-933P-201ENST00000384424 107 ntBASIC5.54□□□□□ -1.52
NOD1Q9Y239 SNORA70.10-201ENST00000384515 134 ntBASIC5.54□□□□□ -1.52
NOD1Q9Y239 RNU6-1179P-201ENST00000384667 107 ntBASIC5.54□□□□□ -1.52
NOD1Q9Y239 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NOD1Q9Y239 AP000580.1-201ENST00000404439 358 ntBASIC5.54□□□□□ -1.52
NOD1Q9Y239 AL353621.1-201ENST00000418219 243 ntBASIC5.54□□□□□ -1.52
NOD1Q9Y239 ELOCP20-201ENST00000422460 345 ntBASIC5.54□□□□□ -1.52
NOD1Q9Y239 RANP8-201ENST00000444720 713 ntBASIC5.54□□□□□ -1.52
NOD1Q9Y239 FO393415.2-201ENST00000480085 343 ntBASIC5.54□□□□□ -1.52
NOD1Q9Y239 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
NOD1Q9Y239 AC008716.1-201ENST00000511084 513 ntBASIC5.54□□□□□ -1.52
NOD1Q9Y239 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC5.54□□□□□ -1.52
NOD1Q9Y239 OR5D17P-201ENST00000531492 978 ntBASIC5.54□□□□□ -1.52
NOD1Q9Y239 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.54□□□□□ -1.52
NOD1Q9Y239 HSPE1P20-201ENST00000538133 289 ntBASIC5.54□□□□□ -1.52
NOD1Q9Y239 AP001880.2-201ENST00000538233 448 ntBASIC5.54□□□□□ -1.52
NOD1Q9Y239 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.54□□□□□ -1.52
NOD1Q9Y239 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.54□□□□□ -1.52
NOD1Q9Y239 MIR4284-201ENST00000578924 81 ntBASIC5.54□□□□□ -1.52
NOD1Q9Y239 MIR7853-201ENST00000584820 132 ntBASIC5.54□□□□□ -1.52
NOD1Q9Y239 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.54□□□□□ -1.52
NOD1Q9Y239 AC034102.8-201ENST00000615146 484 ntBASIC5.54□□□□□ -1.52
NOD1Q9Y239 MIR7703-201ENST00000620784 77 ntBASIC5.54□□□□□ -1.52
NOD1Q9Y239 AC019206.1-201ENST00000621938 425 ntBASIC5.54□□□□□ -1.52
NOD1Q9Y239 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NOD1Q9Y239 AC026951.1-201ENST00000559530 2459 ntBASIC5.54□□□□□ -1.52
NOD1Q9Y239 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NOD1Q9Y239 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.54□□□□□ -1.52
NOD1Q9Y239 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NOD1Q9Y239 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
NOD1Q9Y239 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
NOD1Q9Y239 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
NOD1Q9Y239 AC032011.1-201ENST00000611703 1549 ntBASIC5.53□□□□□ -1.52
NOD1Q9Y239 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NOD1Q9Y239 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NOD1Q9Y239 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
NOD1Q9Y239 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.53□□□□□ -1.52
NOD1Q9Y239 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NOD1Q9Y239 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.53□□□□□ -1.52
NOD1Q9Y239 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NOD1Q9Y239 RNU6-209P-201ENST00000384118 107 ntBASIC5.53□□□□□ -1.52
NOD1Q9Y239 SNORA36C-201ENST00000384289 132 ntBASIC5.53□□□□□ -1.52
NOD1Q9Y239 Y_RNA.483-201ENST00000384380 101 ntBASIC5.53□□□□□ -1.52
NOD1Q9Y239 Y_RNA.551-201ENST00000384661 102 ntBASIC5.53□□□□□ -1.52
NOD1Q9Y239 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.53□□□□□ -1.52
NOD1Q9Y239 AL592045.1-201ENST00000429867 352 ntBASIC5.53□□□□□ -1.52
NOD1Q9Y239 RPL26P6-201ENST00000440913 438 ntBASIC5.53□□□□□ -1.52
NOD1Q9Y239 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.53□□□□□ -1.52
NOD1Q9Y239 snoU13.1-201ENST00000459157 104 ntBASIC5.53□□□□□ -1.52
NOD1Q9Y239 RNU7-169P-201ENST00000459456 61 ntBASIC5.53□□□□□ -1.52
NOD1Q9Y239 RN7SL814P-201ENST00000487715 300 ntBASIC5.53□□□□□ -1.52
NOD1Q9Y239 SUMO2P6-201ENST00000505273 288 ntBASIC5.53□□□□□ -1.52
NOD1Q9Y239 RN7SKP276-201ENST00000516242 268 ntBASIC5.53□□□□□ -1.52
NOD1Q9Y239 Y_RNA.687-201ENST00000516558 91 ntBASIC5.53□□□□□ -1.52
NOD1Q9Y239 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.53□□□□□ -1.52
NOD1Q9Y239 AC068446.3-201ENST00000555285 382 ntBASIC5.53□□□□□ -1.52
NOD1Q9Y239 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.53□□□□□ -1.52
NOD1Q9Y239 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.53□□□□□ -1.52
NOD1Q9Y239 AC026470.2-201ENST00000561492 181 ntBASIC5.53□□□□□ -1.52
NOD1Q9Y239 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.53□□□□□ -1.52
NOD1Q9Y239 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.53□□□□□ -1.52
NOD1Q9Y239 MIR3128-201ENST00000581957 66 ntBASIC5.53□□□□□ -1.52
NOD1Q9Y239 MIR3976-201ENST00000606807 139 ntBASIC5.53□□□□□ -1.52
NOD1Q9Y239 AP005432.2-201ENST00000608162 586 ntBASIC5.53□□□□□ -1.52
NOD1Q9Y239 AC141273.2-201ENST00000618989 130 ntBASIC5.53□□□□□ -1.52
NOD1Q9Y239 AL512643.1-201ENST00000635735 524 ntBASIC5.53□□□□□ -1.52
NOD1Q9Y239 Z99571.1-201ENST00000636677 394 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms