Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 RNU7-187P-201ENST00000458985 68 ntBASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 RNU6-1132P-201ENST00000459214 107 ntBASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 RNA5SP103-201ENST00000459503 118 ntBASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 AC091868.1-201ENST00000508746 304 ntBASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 AC092436.3-201ENST00000511788 257 ntBASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 FTH1P9-201ENST00000513251 355 ntBASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 AC005798.1-201ENST00000513715 387 ntBASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 AC007448.1-201ENST00000582714 234 ntBASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 AC078899.3-201ENST00000599065 212 ntBASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 MIR8069-1-201ENST00000616627 86 ntBASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 AC015967.1-201ENST00000619893 476 ntBASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 MIR8069-2-201ENST00000621412 86 ntBASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 AL731566.1-201ENST00000620490 1937 ntBASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 AC108751.5-201ENST00000492880 1336 ntBASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 DDX10P1-201ENST00000448545 1933 ntBASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 RNA5SP191-201ENST00000362585 102 ntBASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 RNU4-44P-201ENST00000363050 141 ntBASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 Y_RNA.276-201ENST00000364732 109 ntBASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 UBBP2-201ENST00000376781 231 ntBASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 MT-TW-201ENST00000387382 68 ntBASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 RNU1-82P-201ENST00000390851 165 ntBASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 AP000580.1-201ENST00000404439 358 ntBASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 RPS5P7-201ENST00000456664 608 ntBASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 RPL21P103-201ENST00000479921 488 ntBASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 AC093270.2-201ENST00000486157 792 ntBASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 HMGB3P17-201ENST00000504195 649 ntBASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 AC105758.1-201ENST00000506038 399 ntBASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 MTND1P19-201ENST00000511780 315 ntBASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 RNU1-6P-201ENST00000516290 144 ntBASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 Y_RNA.689-201ENST00000516589 107 ntBASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 AC007375.1-201ENST00000554513 578 ntBASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 AC109446.1-201ENST00000566172 220 ntBASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 AC141273.2-201ENST00000618989 130 ntBASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 SALL4P2-201ENST00000423288 2910 ntBASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 AC027287.1-201ENST00000553115 1453 ntBASIC4.94□□□□□ -1.62
AP4E1Q9UPM8 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 AC126323.6-202ENST00000568092 3511 ntBASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 NEAT1-202ENST00000501122 22743 ntBASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 Y_RNA.60-201ENST00000362831 98 ntBASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 SNORA74A-201ENST00000364089 198 ntBASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 AC019155.1-201ENST00000382242 574 ntBASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 RNU6-1062P-201ENST00000383908 107 ntBASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 AL592291.1-201ENST00000403830 352 ntBASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 AC016769.2-201ENST00000414815 475 ntBASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 RPL12P34-201ENST00000424532 479 ntBASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 UBE2V1P4-201ENST00000425374 344 ntBASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 CYCSP43-201ENST00000438233 310 ntBASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 AC008264.1-201ENST00000447612 367 ntBASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 SNORD127-201ENST00000458892 86 ntBASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 RPL7P23-201ENST00000493874 747 ntBASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 SCARNA22-201ENST00000503991 125 ntBASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 IGHV3-76-201ENST00000522465 295 ntBASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 AP000889.1-201ENST00000530968 660 ntBASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 AP001880.2-201ENST00000538233 448 ntBASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 MIR3667-201ENST00000581025 74 ntBASIC4.93□□□□□ -1.62
AP4E1Q9UPM8 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms