Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
VTI1BQ9UEU0 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VTI1BQ9UEU0 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
VTI1BQ9UEU0 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 RNU6-600P-201ENST00000362524 99 ntBASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 SNORD62.1-201ENST00000362541 86 ntBASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 Y_RNA.216-201ENST00000364205 93 ntBASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 SNORA75.4-201ENST00000391278 119 ntBASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 AL592291.1-201ENST00000403830 352 ntBASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 RNU6-1025P-201ENST00000410629 104 ntBASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 Y_RNA.646-201ENST00000410980 101 ntBASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 AC007919.1-201ENST00000429380 217 ntBASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 HMGB1P9-201ENST00000429856 646 ntBASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 AC009127.1-201ENST00000467090 155 ntBASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 AC108751.2-201ENST00000469993 231 ntBASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 AC008638.1-201ENST00000506035 866 ntBASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 AC092436.3-201ENST00000511788 257 ntBASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 RNU6-327P-201ENST00000516270 127 ntBASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 RNU6-1045P-201ENST00000516321 107 ntBASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 Y_RNA.708-201ENST00000516950 96 ntBASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 RNU6-1213P-201ENST00000517075 94 ntBASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 Y_RNA.719-201ENST00000517156 106 ntBASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 RNA5SP291-201ENST00000517222 105 ntBASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 NUTF2P8-201ENST00000604593 363 ntBASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 AP000654.2-201ENST00000605633 586 ntBASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 RNU6-85P-201ENST00000605989 107 ntBASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 SNORD39.4-201ENST00000620099 78 ntBASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 SALL4P2-201ENST00000423288 2910 ntBASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 USP8P1-201ENST00000494673 3183 ntBASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
VTI1BQ9UEU0 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 SNORA75B-201ENST00000384053 137 ntBASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 Y_RNA.422-201ENST00000384054 114 ntBASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 U3.36-201ENST00000408418 213 ntBASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 SNORA77-201ENST00000408716 125 ntBASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 RNU6-293P-201ENST00000411259 106 ntBASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 AF186996.5-201ENST00000418098 904 ntBASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 AL645568.3-201ENST00000433683 316 ntBASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 HIGD1AP11-201ENST00000438361 280 ntBASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 AL163540.1-201ENST00000485382 386 ntBASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 RN7SL214P-201ENST00000487317 265 ntBASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 AC026782.1-201ENST00000512952 449 ntBASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 RNU1-86P-201ENST00000516108 154 ntBASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 RNU1-107P-201ENST00000516617 154 ntBASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 AC022634.1-201ENST00000520765 532 ntBASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 SNRPGP18-201ENST00000553000 214 ntBASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 TRAV37-201ENST00000553906 342 ntBASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 AC233702.9-201ENST00000581528 203 ntBASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 AC011447.4-201ENST00000587562 111 ntBASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 OR7E18P-201ENST00000592589 702 ntBASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 AC018462.2-201ENST00000605375 395 ntBASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 AL162730.1-201ENST00000605734 292 ntBASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 AC040896.1-201ENST00000613819 479 ntBASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 uc_338.22-201ENST00000622722 187 ntBASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 AC007823.1-201ENST00000569932 1566 ntBASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VTI1BQ9UEU0 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.85□□□□□ -1.63
VTI1BQ9UEU0 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VTI1BQ9UEU0 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.85□□□□□ -1.63
VTI1BQ9UEU0 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VTI1BQ9UEU0 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.85□□□□□ -1.63
VTI1BQ9UEU0 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.85□□□□□ -1.63
VTI1BQ9UEU0 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VTI1BQ9UEU0 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
VTI1BQ9UEU0 Y_RNA.324-201ENST00000365165 102 ntBASIC4.85□□□□□ -1.63
VTI1BQ9UEU0 RNU6-1329P-201ENST00000365664 107 ntBASIC4.85□□□□□ -1.63
VTI1BQ9UEU0 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
VTI1BQ9UEU0 MIR606-201ENST00000384851 96 ntBASIC4.85□□□□□ -1.63
VTI1BQ9UEU0 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.85□□□□□ -1.63
VTI1BQ9UEU0 RN7SKP177-201ENST00000410567 355 ntBASIC4.85□□□□□ -1.63
VTI1BQ9UEU0 RN7SKP126-201ENST00000411143 300 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 263.4 ms