Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PRDM9Q9NQV7 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.52□□□□□ -1.53
PRDM9Q9NQV7 RNU2-52P-201ENST00000410680 190 ntBASIC5.52□□□□□ -1.53
PRDM9Q9NQV7 AC023141.8-201ENST00000442554 208 ntBASIC5.52□□□□□ -1.53
PRDM9Q9NQV7 AC144530.1-201ENST00000452862 555 ntBASIC5.52□□□□□ -1.53
PRDM9Q9NQV7 AC079168.2-201ENST00000453977 416 ntBASIC5.52□□□□□ -1.53
PRDM9Q9NQV7 AC006539.1-201ENST00000481419 501 ntBASIC5.52□□□□□ -1.53
PRDM9Q9NQV7 RPS4XP1-201ENST00000482189 787 ntBASIC5.52□□□□□ -1.53
PRDM9Q9NQV7 RNU6-377P-201ENST00000515965 102 ntBASIC5.52□□□□□ -1.53
PRDM9Q9NQV7 AC008694.2-201ENST00000517591 306 ntBASIC5.52□□□□□ -1.53
PRDM9Q9NQV7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.52□□□□□ -1.53
PRDM9Q9NQV7 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PRDM9Q9NQV7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC5.52□□□□□ -1.53
PRDM9Q9NQV7 BNIP3P5-201ENST00000562290 498 ntBASIC5.52□□□□□ -1.53
PRDM9Q9NQV7 AC060780.2-201ENST00000589047 198 ntBASIC5.52□□□□□ -1.53
PRDM9Q9NQV7 AL161798.1-201ENST00000604630 131 ntBASIC5.52□□□□□ -1.53
PRDM9Q9NQV7 AC005828.6-201ENST00000606610 232 ntBASIC5.52□□□□□ -1.53
PRDM9Q9NQV7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC5.52□□□□□ -1.53
PRDM9Q9NQV7 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PRDM9Q9NQV7 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
PRDM9Q9NQV7 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PRDM9Q9NQV7 AC023421.1-201ENST00000590535 1785 ntBASIC5.52□□□□□ -1.53
PRDM9Q9NQV7 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 MIR133A2-201ENST00000347538 102 ntBASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 Y_RNA.71-201ENST00000362892 104 ntBASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 Y_RNA.238-201ENST00000364441 102 ntBASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 RN7SKP78-201ENST00000364711 318 ntBASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 RN7SKP15-201ENST00000364742 309 ntBASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 RNU6-1175P-201ENST00000365200 107 ntBASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 Y_RNA.412-201ENST00000384001 104 ntBASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 MIR34A-201ENST00000385130 110 ntBASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 RPS3P2-201ENST00000421346 701 ntBASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 SEPT7P4-201ENST00000437076 306 ntBASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 RPL12P11-201ENST00000439970 501 ntBASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 AC096638.1-201ENST00000444678 216 ntBASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 RPL10P17-201ENST00000453852 316 ntBASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 RPS5P7-201ENST00000456664 608 ntBASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 snoU13.3-201ENST00000459441 104 ntBASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 RPS4XP22-201ENST00000480755 780 ntBASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 AC007686.1-201ENST00000488511 463 ntBASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 RPL23AP75-201ENST00000491601 451 ntBASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 AC010265.1-201ENST00000513509 211 ntBASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 AP000859.1-201ENST00000525536 307 ntBASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 HMGB1P14-201ENST00000557424 591 ntBASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 MIR4310-201ENST00000582950 57 ntBASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 AL133481.2-203ENST00000607558 139 ntBASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 AC023043.4-201ENST00000612081 449 ntBASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 AC006001.4-201ENST00000622243 395 ntBASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 LINC01963-201ENST00000562038 3148 ntBASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC5.51□□□□□ -1.53
PRDM9Q9NQV7 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 RNU6-263P-201ENST00000363811 107 ntBASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 RNA5SP500-201ENST00000364486 119 ntBASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 RNU6-336P-201ENST00000364891 107 ntBASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 MIR539-201ENST00000365690 78 ntBASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 RNU6-968P-201ENST00000384076 107 ntBASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 MIR10A-201ENST00000385043 110 ntBASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 RPS3AP2-201ENST00000407190 754 ntBASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 SNORA11.3-201ENST00000408471 128 ntBASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 TBCAP2-201ENST00000416175 326 ntBASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 RNF10P1-201ENST00000418589 369 ntBASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 AL662874.1-201ENST00000426065 230 ntBASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 MTATP6P4-201ENST00000427725 675 ntBASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 NUTF2P7-201ENST00000453086 375 ntBASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 AP000870.1-201ENST00000472927 406 ntBASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 AC097462.2-201ENST00000504623 481 ntBASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 SUMO2P18-201ENST00000518873 252 ntBASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 HMGN2P36-201ENST00000529541 409 ntBASIC5.5□□□□□ -1.53
PRDM9Q9NQV7 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms