Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.71□□□□□ -1.82
DDX4Q9NQI0 AC012213.3-201ENST00000577199 777 ntBASIC3.71□□□□□ -1.82
DDX4Q9NQI0 AC011451.2-201ENST00000604303 598 ntBASIC3.71□□□□□ -1.82
DDX4Q9NQI0 AL139286.2-201ENST00000606838 396 ntBASIC3.71□□□□□ -1.82
DDX4Q9NQI0 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.71□□□□□ -1.82
DDX4Q9NQI0 AP000254.1-201ENST00000609934 520 ntBASIC3.71□□□□□ -1.82
DDX4Q9NQI0 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
DDX4Q9NQI0 AC104010.1-201ENST00000616889 150 ntBASIC3.71□□□□□ -1.82
DDX4Q9NQI0 AL356585.4-201ENST00000623078 1229 ntBASIC3.71□□□□□ -1.82
DDX4Q9NQI0 AL603839.4-201ENST00000624658 1005 ntBASIC3.71□□□□□ -1.82
DDX4Q9NQI0 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.71□□□□□ -1.82
DDX4Q9NQI0 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
DDX4Q9NQI0 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
DDX4Q9NQI0 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
DDX4Q9NQI0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
DDX4Q9NQI0 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
DDX4Q9NQI0 AC092104.1-201ENST00000497346 1441 ntBASIC3.7□□□□□ -1.82
DDX4Q9NQI0 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
DDX4Q9NQI0 RNU6-1249P-201ENST00000363237 111 ntBASIC3.7□□□□□ -1.82
DDX4Q9NQI0 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.7□□□□□ -1.82
DDX4Q9NQI0 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.7□□□□□ -1.82
DDX4Q9NQI0 AP002088.1-201ENST00000382740 395 ntBASIC3.7□□□□□ -1.82
DDX4Q9NQI0 OR5H15-201ENST00000383696 930 ntBASIC3.7□□□□□ -1.82
DDX4Q9NQI0 RNU6-1119P-201ENST00000384349 108 ntBASIC3.7□□□□□ -1.82
DDX4Q9NQI0 Y_RNA.608-201ENST00000410647 95 ntBASIC3.7□□□□□ -1.82
DDX4Q9NQI0 RNU2-16P-201ENST00000410712 136 ntBASIC3.7□□□□□ -1.82
DDX4Q9NQI0 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
DDX4Q9NQI0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.7□□□□□ -1.82
DDX4Q9NQI0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.7□□□□□ -1.82
DDX4Q9NQI0 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.7□□□□□ -1.82
DDX4Q9NQI0 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
DDX4Q9NQI0 MTND4LP10-201ENST00000435146 291 ntBASIC3.7□□□□□ -1.82
DDX4Q9NQI0 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.7□□□□□ -1.82
DDX4Q9NQI0 AL033528.1-201ENST00000453780 140 ntBASIC3.7□□□□□ -1.82
DDX4Q9NQI0 AC104308.1-201ENST00000454621 333 ntBASIC3.7□□□□□ -1.82
DDX4Q9NQI0 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.7□□□□□ -1.82
DDX4Q9NQI0 HMGN2P16-201ENST00000456802 261 ntBASIC3.7□□□□□ -1.82
DDX4Q9NQI0 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
DDX4Q9NQI0 RPL23AP41-201ENST00000484754 458 ntBASIC3.7□□□□□ -1.82
DDX4Q9NQI0 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
DDX4Q9NQI0 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
DDX4Q9NQI0 AC109464.2-201ENST00000510242 943 ntBASIC3.7□□□□□ -1.82
DDX4Q9NQI0 RNU6-201P-201ENST00000517100 61 ntBASIC3.7□□□□□ -1.82
DDX4Q9NQI0 SCARNA20.6-201ENST00000517251 106 ntBASIC3.7□□□□□ -1.82
DDX4Q9NQI0 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
DDX4Q9NQI0 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.7□□□□□ -1.82
DDX4Q9NQI0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.7□□□□□ -1.82
DDX4Q9NQI0 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.7□□□□□ -1.82
DDX4Q9NQI0 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.7□□□□□ -1.82
DDX4Q9NQI0 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.7□□□□□ -1.82
DDX4Q9NQI0 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.7□□□□□ -1.82
DDX4Q9NQI0 AC079089.3-201ENST00000603094 673 ntBASIC3.7□□□□□ -1.82
DDX4Q9NQI0 AC103591.3-201ENST00000608684 209 ntBASIC3.7□□□□□ -1.82
DDX4Q9NQI0 AC109347.2-201ENST00000610220 349 ntBASIC3.7□□□□□ -1.82
DDX4Q9NQI0 AL590282.1-201ENST00000610379 1136 ntBASIC3.7□□□□□ -1.82
DDX4Q9NQI0 AL590099.1-201ENST00000615276 138 ntBASIC3.7□□□□□ -1.82
DDX4Q9NQI0 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.7□□□□□ -1.82
DDX4Q9NQI0 AC002550.2-201ENST00000621246 394 ntBASIC3.7□□□□□ -1.82
DDX4Q9NQI0 MIR622-201ENST00000638396 96 ntBASIC3.7□□□□□ -1.82
DDX4Q9NQI0 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
DDX4Q9NQI0 TEX21P-201ENST00000447107 1476 ntBASIC3.7□□□□□ -1.82
DDX4Q9NQI0 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
DDX4Q9NQI0 AL672296.1-201ENST00000427780 2158 ntBASIC3.7□□□□□ -1.82
DDX4Q9NQI0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.7□□□□□ -1.82
DDX4Q9NQI0 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.69□□□□□ -1.82
DDX4Q9NQI0 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.69□□□□□ -1.82
DDX4Q9NQI0 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
DDX4Q9NQI0 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
DDX4Q9NQI0 SNORA75-201ENST00000384158 137 ntBASIC3.69□□□□□ -1.82
DDX4Q9NQI0 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
DDX4Q9NQI0 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
DDX4Q9NQI0 MTCO3P41-201ENST00000414801 328 ntBASIC3.69□□□□□ -1.82
DDX4Q9NQI0 USP9YP13-201ENST00000417797 480 ntBASIC3.69□□□□□ -1.82
DDX4Q9NQI0 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.69□□□□□ -1.82
DDX4Q9NQI0 LARP1BP2-201ENST00000486594 519 ntBASIC3.69□□□□□ -1.82
DDX4Q9NQI0 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.69□□□□□ -1.82
DDX4Q9NQI0 AP003497.1-201ENST00000528472 562 ntBASIC3.69□□□□□ -1.82
DDX4Q9NQI0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
DDX4Q9NQI0 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
DDX4Q9NQI0 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.69□□□□□ -1.82
DDX4Q9NQI0 CR383656.7-201ENST00000548164 174 ntBASIC3.69□□□□□ -1.82
DDX4Q9NQI0 AC012182.1-201ENST00000570133 895 ntBASIC3.69□□□□□ -1.82
DDX4Q9NQI0 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
DDX4Q9NQI0 AC087683.1-201ENST00000591187 441 ntBASIC3.69□□□□□ -1.82
DDX4Q9NQI0 SEPT7P9-203ENST00000604116 343 ntBASIC3.69□□□□□ -1.82
DDX4Q9NQI0 AL031176.1-201ENST00000604554 466 ntBASIC3.69□□□□□ -1.82
DDX4Q9NQI0 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.69□□□□□ -1.82
DDX4Q9NQI0 AC131902.3-201ENST00000611767 581 ntBASIC3.69□□□□□ -1.82
DDX4Q9NQI0 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.69□□□□□ -1.82
DDX4Q9NQI0 AC018755.4-201ENST00000619715 454 ntBASIC3.69□□□□□ -1.82
DDX4Q9NQI0 AC011460.1-201ENST00000636268 1834 ntBASIC3.69□□□□□ -1.82
DDX4Q9NQI0 AC009902.3-201ENST00000606235 2172 ntBASIC3.69□□□□□ -1.82
DDX4Q9NQI0 RIOK3P1-201ENST00000418778 1528 ntBASIC3.69□□□□□ -1.82
DDX4Q9NQI0 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.69□□□□□ -1.82
DDX4Q9NQI0 AC092125.1-201ENST00000562568 1995 ntBASIC3.69□□□□□ -1.82
DDX4Q9NQI0 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
DDX4Q9NQI0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.68□□□□□ -1.82
DDX4Q9NQI0 AP001486.2-201ENST00000561652 5113 ntBASIC3.68□□□□□ -1.82
DDX4Q9NQI0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
DDX4Q9NQI0 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms