Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 MIR26A1-201ENST00000362205 77 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 RNU6-462P-201ENST00000362659 105 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 RNU6-289P-201ENST00000364093 107 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 DEFA7P-201ENST00000382676 285 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 RNU6-750P-201ENST00000390946 107 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 RN7SKP266-201ENST00000410232 287 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 UBE2FP1-201ENST00000416536 447 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 AC083875.1-201ENST00000419509 405 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 USP9YP26-201ENST00000421008 661 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 AL513175.2-201ENST00000422071 443 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 AC097713.2-201ENST00000430199 356 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 EEF1E1P1-201ENST00000446998 430 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 ST13P20-201ENST00000447996 1065 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 TPT1P14-201ENST00000448018 505 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 AP000542.1-201ENST00000448473 371 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 AC233279.1-201ENST00000455300 423 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 snoU13.22-201ENST00000459428 104 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 AC008481.1-201ENST00000463278 396 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 RN7SL542P-201ENST00000467147 294 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 AIG1P1-201ENST00000503376 148 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 AC093809.1-201ENST00000509155 340 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 NDUFB4P2-201ENST00000509515 391 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 MTND5P4-201ENST00000514978 288 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 AC138761.3-201ENST00000579993 334 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 AP000787.2-201ENST00000604432 568 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 AC069200.1-201ENST00000609511 323 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 BX664608.1-201ENST00000610519 487 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 AC006378.2-201ENST00000623178 2476 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 AC010329.5-201ENST00000623497 2174 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 AL359693.1-201ENST00000614959 2407 ntBASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SND1-IT1Q9HBX3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 RNU6-884P-201ENST00000363889 107 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 RNU6-853P-201ENST00000364306 107 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 RNA5SP479-201ENST00000364858 117 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 RNU4-22P-201ENST00000411058 166 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 MTCO1P17-201ENST00000411522 491 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 NDUFS5P4-201ENST00000412983 318 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 SEPT2P1-201ENST00000419651 180 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 USP12PX-201ENST00000432383 1057 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 AC098831.1-201ENST00000440661 216 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 AC020550.1-201ENST00000447385 163 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 PRDX3P3-201ENST00000447765 522 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 MTCO1P27-201ENST00000448269 226 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 RPL12P25-201ENST00000455592 494 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 AC091153.1-201ENST00000466297 402 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 AC068587.1-201ENST00000483613 781 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 AC026801.1-201ENST00000497178 464 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 AC116353.3-201ENST00000511215 249 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 AC010587.2-201ENST00000511727 448 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 MTND5P13-201ENST00000513046 1079 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 RNU5F-8P-201ENST00000515941 111 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 AC023632.4-201ENST00000517783 191 ntBASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.86□□□□□ -2.11
SND1-IT1Q9HBX3 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms