Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 RNU6-1078P-201ENST00000364522 103 ntBASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 OR4K11P-201ENST00000431829 904 ntBASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 RPL37P21-201ENST00000435890 276 ntBASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 FAM103A2P-201ENST00000444122 354 ntBASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 RPL23AP31-201ENST00000456160 467 ntBASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 SNRPGP3-201ENST00000469405 227 ntBASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 HSPE1P6-201ENST00000479457 291 ntBASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 RN7SL20P-201ENST00000488827 297 ntBASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 AC005178.1-201ENST00000508392 440 ntBASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 AC008549.1-201ENST00000512900 643 ntBASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 RN7SKP60-201ENST00000516985 239 ntBASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 SNRPGP16-201ENST00000533275 226 ntBASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 MIR3915-201ENST00000578518 97 ntBASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 MIR4524B-201ENST00000581569 115 ntBASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 AC112187.2-201ENST00000604345 283 ntBASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 AC121247.2-201ENST00000604776 136 ntBASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 AL158211.4-201ENST00000606988 584 ntBASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 AC002550.2-201ENST00000621246 394 ntBASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
ZNF541Q9H0D2 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 RNU6-500P-201ENST00000362349 107 ntBASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 SNORA67.4-201ENST00000384688 142 ntBASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 RNU6-114P-201ENST00000384704 105 ntBASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 U8.14-201ENST00000390843 143 ntBASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 MTCYBP36-201ENST00000404146 440 ntBASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 HSPE1P26-201ENST00000405341 275 ntBASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 AL359704.1-201ENST00000411586 781 ntBASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 AC003685.2-201ENST00000422795 395 ntBASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 AL512286.1-201ENST00000439244 400 ntBASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 AP000936.2-201ENST00000447151 681 ntBASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 NIPA2P5-201ENST00000452282 464 ntBASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 AL136097.1-201ENST00000456945 913 ntBASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 AC004801.2-202ENST00000463559 283 ntBASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 AL024509.2-201ENST00000493462 493 ntBASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 HMGB1P22-201ENST00000505315 124 ntBASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 AC010486.3-201ENST00000511602 785 ntBASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 RNU6-528P-201ENST00000516926 100 ntBASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 ROCK1P1-201ENST00000573767 549 ntBASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 AC008507.1-201ENST00000587506 734 ntBASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 AP001029.3-201ENST00000588063 596 ntBASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 TPMTP1-201ENST00000592307 737 ntBASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 AL355596.1-201ENST00000565399 3996 ntBASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 AC092125.1-201ENST00000562568 1995 ntBASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 AP001148.1-201ENST00000624124 2359 ntBASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
ZNF541Q9H0D2 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 RNU6-859P-201ENST00000362728 107 ntBASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 RNU6-1155P-201ENST00000363554 107 ntBASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 RNU1-112P-201ENST00000364401 164 ntBASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 SNORA9.2-201ENST00000365361 133 ntBASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 RNU6-359P-201ENST00000365466 108 ntBASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 MIR135A2-201ENST00000384854 100 ntBASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 U3.20-201ENST00000390909 217 ntBASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 RNU2-43P-201ENST00000410306 190 ntBASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 RNA5SP31-201ENST00000411144 127 ntBASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 TPMTP3-201ENST00000411928 735 ntBASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 SSXP9-201ENST00000417503 292 ntBASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 RPS27AP14-201ENST00000422868 454 ntBASIC3.49□□□□□ -1.85
ZNF541Q9H0D2 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms