Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AL139397.2-201ENST00000404529 772 ntBASIC5.16□□□□□ -1.58
CNTNAP4Q9C0A0 RNU6-985P-201ENST00000410182 104 ntBASIC5.16□□□□□ -1.58
CNTNAP4Q9C0A0 EZH2P1-201ENST00000431167 291 ntBASIC5.16□□□□□ -1.58
CNTNAP4Q9C0A0 CYCSP43-201ENST00000438233 310 ntBASIC5.16□□□□□ -1.58
CNTNAP4Q9C0A0 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.16□□□□□ -1.58
CNTNAP4Q9C0A0 PRPS1P1-201ENST00000445305 876 ntBASIC5.16□□□□□ -1.58
CNTNAP4Q9C0A0 AL445433.1-201ENST00000457507 257 ntBASIC5.16□□□□□ -1.58
CNTNAP4Q9C0A0 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.16□□□□□ -1.58
CNTNAP4Q9C0A0 RNU7-59P-201ENST00000459101 61 ntBASIC5.16□□□□□ -1.58
CNTNAP4Q9C0A0 AC006511.1-201ENST00000470614 315 ntBASIC5.16□□□□□ -1.58
CNTNAP4Q9C0A0 RPL29P14-201ENST00000495837 428 ntBASIC5.16□□□□□ -1.58
CNTNAP4Q9C0A0 RN7SKP24-201ENST00000515888 284 ntBASIC5.16□□□□□ -1.58
CNTNAP4Q9C0A0 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CNTNAP4Q9C0A0 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.16□□□□□ -1.58
CNTNAP4Q9C0A0 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.16□□□□□ -1.58
CNTNAP4Q9C0A0 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.16□□□□□ -1.58
CNTNAP4Q9C0A0 AC092807.2-201ENST00000609367 243 ntBASIC5.16□□□□□ -1.58
CNTNAP4Q9C0A0 AL391261.4-201ENST00000616012 481 ntBASIC5.16□□□□□ -1.58
CNTNAP4Q9C0A0 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.16□□□□□ -1.58
CNTNAP4Q9C0A0 AC091953.5-201ENST00000622919 233 ntBASIC5.16□□□□□ -1.58
CNTNAP4Q9C0A0 AC022418.1-201ENST00000624118 445 ntBASIC5.16□□□□□ -1.58
CNTNAP4Q9C0A0 U6.114-201ENST00000636407 96 ntBASIC5.16□□□□□ -1.58
CNTNAP4Q9C0A0 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.16□□□□□ -1.58
CNTNAP4Q9C0A0 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.16□□□□□ -1.58
CNTNAP4Q9C0A0 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CNTNAP4Q9C0A0 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CNTNAP4Q9C0A0 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.15□□□□□ -1.58
CNTNAP4Q9C0A0 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CNTNAP4Q9C0A0 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
CNTNAP4Q9C0A0 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 AC009313.2-201ENST00000417893 1941 ntBASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 RNU6-511P-201ENST00000363496 107 ntBASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 RNA5SP22-201ENST00000365393 109 ntBASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 CISD1P1-201ENST00000393907 327 ntBASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 RN7SKP247-201ENST00000411094 308 ntBASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 AC069218.2-201ENST00000411665 344 ntBASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 AC009302.1-201ENST00000417147 390 ntBASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 SYF2P2-201ENST00000417620 583 ntBASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 ATG3P1-201ENST00000419507 911 ntBASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 AL031736.2-201ENST00000426573 787 ntBASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 AL731563.1-201ENST00000442202 214 ntBASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 AL031584.1-201ENST00000447169 754 ntBASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 AC068305.1-201ENST00000497406 726 ntBASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 AC079140.5-201ENST00000507882 310 ntBASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 RNU6-1088P-201ENST00000516850 104 ntBASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 RNA5SP454-201ENST00000517231 127 ntBASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 OR4P1P-201ENST00000530808 1136 ntBASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 AC091516.1-201ENST00000549191 703 ntBASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 MIR3942-201ENST00000585264 109 ntBASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 SRGNP1-201ENST00000603392 451 ntBASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 AC007938.3-201ENST00000604965 623 ntBASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 AL157817.1-201ENST00000614264 790 ntBASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 HMGB1P24-202ENST00000615653 685 ntBASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 U4.1-201ENST00000620349 87 ntBASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CNTNAP4Q9C0A0 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNTNAP4Q9C0A0 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.14□□□□□ -1.59
CNTNAP4Q9C0A0 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.14□□□□□ -1.59
CNTNAP4Q9C0A0 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNTNAP4Q9C0A0 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNTNAP4Q9C0A0 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNTNAP4Q9C0A0 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CNTNAP4Q9C0A0 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNTNAP4Q9C0A0 RNU6-1188P-201ENST00000363795 107 ntBASIC5.14□□□□□ -1.59
CNTNAP4Q9C0A0 RNU6-641P-201ENST00000384006 107 ntBASIC5.14□□□□□ -1.59
CNTNAP4Q9C0A0 RNU2-3P-201ENST00000410144 191 ntBASIC5.14□□□□□ -1.59
CNTNAP4Q9C0A0 RNU6-954P-201ENST00000411355 107 ntBASIC5.14□□□□□ -1.59
CNTNAP4Q9C0A0 CTSL3P-202ENST00000412179 788 ntBASIC5.14□□□□□ -1.59
CNTNAP4Q9C0A0 RPL7P10-201ENST00000417407 739 ntBASIC5.14□□□□□ -1.59
CNTNAP4Q9C0A0 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.14□□□□□ -1.59
CNTNAP4Q9C0A0 AL118520.1-201ENST00000450770 291 ntBASIC5.14□□□□□ -1.59
CNTNAP4Q9C0A0 AL354710.1-201ENST00000453641 246 ntBASIC5.14□□□□□ -1.59
CNTNAP4Q9C0A0 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.14□□□□□ -1.59
CNTNAP4Q9C0A0 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
CNTNAP4Q9C0A0 AC110768.1-201ENST00000509222 400 ntBASIC5.14□□□□□ -1.59
CNTNAP4Q9C0A0 FTH1P11-201ENST00000517577 551 ntBASIC5.14□□□□□ -1.59
CNTNAP4Q9C0A0 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.14□□□□□ -1.59
CNTNAP4Q9C0A0 AC103843.2-201ENST00000530523 682 ntBASIC5.14□□□□□ -1.59
CNTNAP4Q9C0A0 AL137161.1-201ENST00000532231 390 ntBASIC5.14□□□□□ -1.59
CNTNAP4Q9C0A0 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CNTNAP4Q9C0A0 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms