Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 RNU6-239P-201ENST00000390990 99 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 BTF3L4P2-201ENST00000392798 346 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 UBA52P6-201ENST00000399822 382 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 MIR513C-201ENST00000401352 84 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 RN7SKP117-201ENST00000410175 264 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 AP000907.1-201ENST00000428428 510 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 AC097463.1-201ENST00000447288 481 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 AC009237.7-201ENST00000447357 229 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 RN7SL346P-201ENST00000491561 294 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 RNA5SP418-201ENST00000515951 117 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 RNU6-1095P-201ENST00000516148 108 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 RNU6-927P-201ENST00000516199 100 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 SNORA25.12-201ENST00000516202 82 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 RN7SKP277-201ENST00000516895 283 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 IGKV1D-32-201ENST00000517449 318 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 AC005476.1-201ENST00000554427 397 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 HMGB1P14-201ENST00000557424 591 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 AC055872.1-201ENST00000570978 278 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 MIR4679-2-201ENST00000578358 77 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 AC123786.2-201ENST00000603459 275 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 AC005046.1-201ENST00000608515 625 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 uc_338.26-201ENST00000612659 160 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 AC068831.7-201ENST00000616954 363 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 AC008873.1-201ENST00000625051 138 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 AC073869.8-201ENST00000641806 335 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 SAMMSON-226ENST00000642089 1582 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 AC092376.2-201ENST00000622621 4116 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 AL451142.2-201ENST00000429076 2090 ntBASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 Y_RNA.230-201ENST00000364348 109 ntBASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 RNU6-512P-201ENST00000364438 103 ntBASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 RNU105B-201ENST00000364478 208 ntBASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 RNU6-211P-201ENST00000384047 107 ntBASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 RNU6-20P-201ENST00000384106 107 ntBASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 AL645939.3-201ENST00000435408 225 ntBASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 KRTAP2-5P-201ENST00000446109 396 ntBASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 SNORA40.9-201ENST00000515895 93 ntBASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 RNU6-377P-201ENST00000515965 102 ntBASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 IGKV1OR22-1-201ENST00000521497 360 ntBASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 AC008507.3-201ENST00000585753 472 ntBASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 AC010928.2-201ENST00000588017 287 ntBASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 AC234771.5-201ENST00000600161 514 ntBASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 MIR6133-201ENST00000617057 108 ntBASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSBP4Q9BWG4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms