Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
FOXC2Q99958 SDAD1P2-201ENST00000441308 2028 ntBASIC2.39□□□□□ -2.03
FOXC2Q99958 MTND5P19-201ENST00000424872 1794 ntBASIC2.39□□□□□ -2.03
FOXC2Q99958 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
FOXC2Q99958 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
FOXC2Q99958 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
FOXC2Q99958 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
FOXC2Q99958 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.39□□□□□ -2.03
FOXC2Q99958 RNU6-1035P-201ENST00000384477 107 ntBASIC2.39□□□□□ -2.03
FOXC2Q99958 AL138827.1-201ENST00000402666 306 ntBASIC2.39□□□□□ -2.03
FOXC2Q99958 AL136310.1-201ENST00000404926 654 ntBASIC2.39□□□□□ -2.03
FOXC2Q99958 RNU4-22P-201ENST00000411058 166 ntBASIC2.39□□□□□ -2.03
FOXC2Q99958 MTATP6P20-201ENST00000414147 562 ntBASIC2.39□□□□□ -2.03
FOXC2Q99958 TPMTP2-201ENST00000414372 726 ntBASIC2.39□□□□□ -2.03
FOXC2Q99958 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.39□□□□□ -2.03
FOXC2Q99958 PPP1R11P2-201ENST00000423543 382 ntBASIC2.39□□□□□ -2.03
FOXC2Q99958 RPL7L1P10-201ENST00000427790 463 ntBASIC2.39□□□□□ -2.03
FOXC2Q99958 UBBP3-201ENST00000445497 241 ntBASIC2.39□□□□□ -2.03
FOXC2Q99958 AL009048.1-201ENST00000450437 298 ntBASIC2.39□□□□□ -2.03
FOXC2Q99958 AL109741.2-201ENST00000455561 343 ntBASIC2.39□□□□□ -2.03
FOXC2Q99958 AC069528.1-202ENST00000482888 637 ntBASIC2.39□□□□□ -2.03
FOXC2Q99958 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.39□□□□□ -2.03
FOXC2Q99958 AC113347.3-201ENST00000509113 148 ntBASIC2.39□□□□□ -2.03
FOXC2Q99958 AC096725.1-201ENST00000514266 313 ntBASIC2.39□□□□□ -2.03
FOXC2Q99958 AC093677.1-201ENST00000514414 678 ntBASIC2.39□□□□□ -2.03
FOXC2Q99958 SCARNA15.2-201ENST00000516409 127 ntBASIC2.39□□□□□ -2.03
FOXC2Q99958 RNU6-528P-201ENST00000516926 100 ntBASIC2.39□□□□□ -2.03
FOXC2Q99958 ATP5F1P5-201ENST00000526403 760 ntBASIC2.39□□□□□ -2.03
FOXC2Q99958 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
FOXC2Q99958 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
FOXC2Q99958 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.39□□□□□ -2.03
FOXC2Q99958 DEFB122-202ENST00000569013 197 ntBASIC2.39□□□□□ -2.03
FOXC2Q99958 MTND1P8-201ENST00000571424 950 ntBASIC2.39□□□□□ -2.03
FOXC2Q99958 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.39□□□□□ -2.03
FOXC2Q99958 BNIP3P40-201ENST00000596017 556 ntBASIC2.39□□□□□ -2.03
FOXC2Q99958 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.39□□□□□ -2.03
FOXC2Q99958 AC068313.1-201ENST00000604028 1008 ntBASIC2.39□□□□□ -2.03
FOXC2Q99958 RNU4-5P-201ENST00000607255 135 ntBASIC2.39□□□□□ -2.03
FOXC2Q99958 AL590099.1-201ENST00000615276 138 ntBASIC2.39□□□□□ -2.03
FOXC2Q99958 AC002550.2-201ENST00000621246 394 ntBASIC2.39□□□□□ -2.03
FOXC2Q99958 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.39□□□□□ -2.03
FOXC2Q99958 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
FOXC2Q99958 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.39□□□□□ -2.03
FOXC2Q99958 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.39□□□□□ -2.03
FOXC2Q99958 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.38□□□□□ -2.03
FOXC2Q99958 Y_RNA.408-201ENST00000383987 102 ntBASIC2.38□□□□□ -2.03
FOXC2Q99958 SNORA36C-201ENST00000384289 132 ntBASIC2.38□□□□□ -2.03
FOXC2Q99958 RNU6-1122P-201ENST00000384449 107 ntBASIC2.38□□□□□ -2.03
FOXC2Q99958 SNORA46-201ENST00000384762 135 ntBASIC2.38□□□□□ -2.03
FOXC2Q99958 MIR592-201ENST00000384959 97 ntBASIC2.38□□□□□ -2.03
FOXC2Q99958 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
FOXC2Q99958 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
FOXC2Q99958 ERHP2-201ENST00000402323 299 ntBASIC2.38□□□□□ -2.03
FOXC2Q99958 FO393413.1-201ENST00000402892 195 ntBASIC2.38□□□□□ -2.03
FOXC2Q99958 SNORA3.2-201ENST00000408221 125 ntBASIC2.38□□□□□ -2.03
FOXC2Q99958 AC068533.2-201ENST00000411872 306 ntBASIC2.38□□□□□ -2.03
FOXC2Q99958 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.38□□□□□ -2.03
FOXC2Q99958 AL139421.1-201ENST00000423010 169 ntBASIC2.38□□□□□ -2.03
FOXC2Q99958 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.38□□□□□ -2.03
FOXC2Q99958 HMGB3P12-201ENST00000438745 556 ntBASIC2.38□□□□□ -2.03
FOXC2Q99958 AL135752.1-201ENST00000479477 471 ntBASIC2.38□□□□□ -2.03
FOXC2Q99958 MTCYBP17-201ENST00000503579 789 ntBASIC2.38□□□□□ -2.03
FOXC2Q99958 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.38□□□□□ -2.03
FOXC2Q99958 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.38□□□□□ -2.03
FOXC2Q99958 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.38□□□□□ -2.03
FOXC2Q99958 HSPE1P20-201ENST00000538133 289 ntBASIC2.38□□□□□ -2.03
FOXC2Q99958 AC128657.1-201ENST00000549459 145 ntBASIC2.38□□□□□ -2.03
FOXC2Q99958 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
FOXC2Q99958 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.38□□□□□ -2.03
FOXC2Q99958 MIR4509-3-201ENST00000578671 94 ntBASIC2.38□□□□□ -2.03
FOXC2Q99958 MIR4509-2-201ENST00000583920 94 ntBASIC2.38□□□□□ -2.03
FOXC2Q99958 AC078899.3-201ENST00000599065 212 ntBASIC2.38□□□□□ -2.03
FOXC2Q99958 AC004067.1-201ENST00000608733 700 ntBASIC2.38□□□□□ -2.03
FOXC2Q99958 AC004852.3-201ENST00000614131 326 ntBASIC2.38□□□□□ -2.03
FOXC2Q99958 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
FOXC2Q99958 AL357080.1-201ENST00000617394 239 ntBASIC2.38□□□□□ -2.03
FOXC2Q99958 MIR4509-1-201ENST00000618224 94 ntBASIC2.38□□□□□ -2.03
FOXC2Q99958 AC007318.2-201ENST00000620999 243 ntBASIC2.38□□□□□ -2.03
FOXC2Q99958 AC025034.2-201ENST00000623264 286 ntBASIC2.38□□□□□ -2.03
FOXC2Q99958 AC079597.1-201ENST00000624306 508 ntBASIC2.38□□□□□ -2.03
FOXC2Q99958 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.38□□□□□ -2.03
FOXC2Q99958 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.38□□□□□ -2.03
FOXC2Q99958 OR5H6-203ENST00000642105 978 ntBASIC2.38□□□□□ -2.03
FOXC2Q99958 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.38□□□□□ -2.03
FOXC2Q99958 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
FOXC2Q99958 AC109315.1-201ENST00000584143 1347 ntBASIC2.38□□□□□ -2.03
FOXC2Q99958 MTCO1P9-201ENST00000505577 1534 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.37□□□□□ -2.03
FOXC2Q99958 AL049641.1-201ENST00000441055 1948 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
FOXC2Q99958 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
FOXC2Q99958 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
FOXC2Q99958 MIR514A1-201ENST00000385133 98 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 RNA5SP354-201ENST00000391247 136 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 RNU6-584P-201ENST00000410350 95 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 RNA5SP274-201ENST00000410484 108 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 RN7SKP123-201ENST00000410732 291 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 Z85995.1-201ENST00000415547 335 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 RPS3AP37-201ENST00000419176 745 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 AL513175.2-201ENST00000422071 443 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms