Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 UBBP3-201ENST00000445497 241 ntBASIC2.69□□□□□ -1.98
NPAS2Q99743 CBWD4P-201ENST00000445695 655 ntBASIC2.69□□□□□ -1.98
NPAS2Q99743 EXOSC3P1-201ENST00000448649 500 ntBASIC2.69□□□□□ -1.98
NPAS2Q99743 snoU109.3-201ENST00000459477 145 ntBASIC2.69□□□□□ -1.98
NPAS2Q99743 RPL30P9-201ENST00000465586 330 ntBASIC2.69□□□□□ -1.98
NPAS2Q99743 AC021382.1-201ENST00000483523 359 ntBASIC2.69□□□□□ -1.98
NPAS2Q99743 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.69□□□□□ -1.98
NPAS2Q99743 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.69□□□□□ -1.98
NPAS2Q99743 AP003497.1-201ENST00000528472 562 ntBASIC2.69□□□□□ -1.98
NPAS2Q99743 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.69□□□□□ -1.98
NPAS2Q99743 GTF3AP2-201ENST00000557014 266 ntBASIC2.69□□□□□ -1.98
NPAS2Q99743 TRAV28-201ENST00000557548 323 ntBASIC2.69□□□□□ -1.98
NPAS2Q99743 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.69□□□□□ -1.98
NPAS2Q99743 AC090888.1-201ENST00000561335 1141 ntBASIC2.69□□□□□ -1.98
NPAS2Q99743 AC068135.2-201ENST00000569293 1028 ntBASIC2.69□□□□□ -1.98
NPAS2Q99743 AC091057.2-201ENST00000602594 792 ntBASIC2.69□□□□□ -1.98
NPAS2Q99743 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.69□□□□□ -1.98
NPAS2Q99743 AC103710.4-201ENST00000609301 899 ntBASIC2.69□□□□□ -1.98
NPAS2Q99743 AC009268.2-201ENST00000621925 457 ntBASIC2.69□□□□□ -1.98
NPAS2Q99743 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
NPAS2Q99743 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
NPAS2Q99743 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
NPAS2Q99743 AC026241.1-201ENST00000517873 2142 ntBASIC2.68□□□□□ -1.98
NPAS2Q99743 AC096644.4-201ENST00000563417 2912 ntBASIC2.68□□□□□ -1.98
NPAS2Q99743 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
NPAS2Q99743 RNU6-7-201ENST00000364784 107 ntBASIC2.68□□□□□ -1.98
NPAS2Q99743 Y_RNA.311-201ENST00000365068 96 ntBASIC2.68□□□□□ -1.98
NPAS2Q99743 RNU6-8-201ENST00000365467 107 ntBASIC2.68□□□□□ -1.98
NPAS2Q99743 RNU6-1207P-201ENST00000384343 107 ntBASIC2.68□□□□□ -1.98
NPAS2Q99743 RNA5SP354-201ENST00000391247 136 ntBASIC2.68□□□□□ -1.98
NPAS2Q99743 RPL23AP29-201ENST00000397284 453 ntBASIC2.68□□□□□ -1.98
NPAS2Q99743 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NPAS2Q99743 RNU6-193P-201ENST00000410977 107 ntBASIC2.68□□□□□ -1.98
NPAS2Q99743 RPL7P10-201ENST00000417407 739 ntBASIC2.68□□□□□ -1.98
NPAS2Q99743 AC099548.1-201ENST00000421443 426 ntBASIC2.68□□□□□ -1.98
NPAS2Q99743 AL953862.1-201ENST00000423016 168 ntBASIC2.68□□□□□ -1.98
NPAS2Q99743 AC092047.1-201ENST00000424997 240 ntBASIC2.68□□□□□ -1.98
NPAS2Q99743 RPL7P37-201ENST00000425095 738 ntBASIC2.68□□□□□ -1.98
NPAS2Q99743 MTCO2P23-201ENST00000425216 680 ntBASIC2.68□□□□□ -1.98
NPAS2Q99743 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.68□□□□□ -1.98
NPAS2Q99743 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.68□□□□□ -1.98
NPAS2Q99743 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.68□□□□□ -1.98
NPAS2Q99743 ZNF886P-201ENST00000450781 723 ntBASIC2.68□□□□□ -1.98
NPAS2Q99743 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.68□□□□□ -1.98
NPAS2Q99743 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.68□□□□□ -1.98
NPAS2Q99743 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.68□□□□□ -1.98
NPAS2Q99743 AC128657.1-201ENST00000549459 145 ntBASIC2.68□□□□□ -1.98
NPAS2Q99743 AC079600.2-201ENST00000550076 130 ntBASIC2.68□□□□□ -1.98
NPAS2Q99743 AL355836.1-201ENST00000555951 870 ntBASIC2.68□□□□□ -1.98
NPAS2Q99743 AC027807.1-201ENST00000559921 996 ntBASIC2.68□□□□□ -1.98
NPAS2Q99743 ZNF861P-201ENST00000588126 639 ntBASIC2.68□□□□□ -1.98
NPAS2Q99743 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.68□□□□□ -1.98
NPAS2Q99743 AL161729.4-201ENST00000604650 476 ntBASIC2.68□□□□□ -1.98
NPAS2Q99743 AL035413.2-201ENST00000604801 525 ntBASIC2.68□□□□□ -1.98
NPAS2Q99743 CR381653.2-201ENST00000624041 768 ntBASIC2.68□□□□□ -1.98
NPAS2Q99743 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NPAS2Q99743 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NPAS2Q99743 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
NPAS2Q99743 SNORA5B-201ENST00000363786 132 ntBASIC2.67□□□□□ -1.98
NPAS2Q99743 SNORD56.5-201ENST00000364281 72 ntBASIC2.67□□□□□ -1.98
NPAS2Q99743 MIR767-201ENST00000390228 109 ntBASIC2.67□□□□□ -1.98
NPAS2Q99743 MIR1284-201ENST00000408337 120 ntBASIC2.67□□□□□ -1.98
NPAS2Q99743 AL592148.1-201ENST00000413568 445 ntBASIC2.67□□□□□ -1.98
NPAS2Q99743 AL513477.1-202ENST00000417061 214 ntBASIC2.67□□□□□ -1.98
NPAS2Q99743 AC109583.1-201ENST00000432156 268 ntBASIC2.67□□□□□ -1.98
NPAS2Q99743 NANOGP2-201ENST00000435391 727 ntBASIC2.67□□□□□ -1.98
NPAS2Q99743 AL513043.1-201ENST00000439124 535 ntBASIC2.67□□□□□ -1.98
NPAS2Q99743 RPL21P2-201ENST00000440049 481 ntBASIC2.67□□□□□ -1.98
NPAS2Q99743 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.67□□□□□ -1.98
NPAS2Q99743 PIGFP3-201ENST00000441918 722 ntBASIC2.67□□□□□ -1.98
NPAS2Q99743 AC112653.1-201ENST00000443851 386 ntBASIC2.67□□□□□ -1.98
NPAS2Q99743 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.67□□□□□ -1.98
NPAS2Q99743 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.67□□□□□ -1.98
NPAS2Q99743 RPS20P20-201ENST00000460498 340 ntBASIC2.67□□□□□ -1.98
NPAS2Q99743 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NPAS2Q99743 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.67□□□□□ -1.98
NPAS2Q99743 AC079395.1-201ENST00000510981 262 ntBASIC2.67□□□□□ -1.98
NPAS2Q99743 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.67□□□□□ -1.98
NPAS2Q99743 RNA5SP356-201ENST00000515972 94 ntBASIC2.67□□□□□ -1.98
NPAS2Q99743 RNU6-150P-201ENST00000516237 95 ntBASIC2.67□□□□□ -1.98
NPAS2Q99743 RNA5SP367-201ENST00000516557 118 ntBASIC2.67□□□□□ -1.98
NPAS2Q99743 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NPAS2Q99743 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.67□□□□□ -1.98
NPAS2Q99743 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NPAS2Q99743 SETP2-201ENST00000553886 926 ntBASIC2.67□□□□□ -1.98
NPAS2Q99743 MTCYBP23-201ENST00000558717 1102 ntBASIC2.67□□□□□ -1.98
NPAS2Q99743 AL157392.4-201ENST00000609756 345 ntBASIC2.67□□□□□ -1.98
NPAS2Q99743 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.67□□□□□ -1.98
NPAS2Q99743 AC109809.1-201ENST00000619665 545 ntBASIC2.67□□□□□ -1.98
NPAS2Q99743 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.67□□□□□ -1.98
NPAS2Q99743 AP003399.1-201ENST00000637534 361 ntBASIC2.67□□□□□ -1.98
NPAS2Q99743 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.67□□□□□ -1.98
NPAS2Q99743 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
NPAS2Q99743 AC092447.10-201ENST00000620607 1652 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 RNU6-217P-201ENST00000384164 104 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 RNU6-851P-201ENST00000384565 107 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 MTND4P13-201ENST00000402078 1023 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 FO393413.1-201ENST00000402892 195 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 VN1R51P-201ENST00000411675 945 ntBASIC2.66□□□□□ -1.98
NPAS2Q99743 MTND1P21-201ENST00000412991 285 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms