Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 SNORD14A-201ENST00000606526 91 ntBASIC2.07□□□□□ -2.08
CCDC42Q96M95 AP001033.2-201ENST00000609701 1003 ntBASIC2.07□□□□□ -2.08
CCDC42Q96M95 AC103710.1-201ENST00000610003 901 ntBASIC2.07□□□□□ -2.08
CCDC42Q96M95 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC42Q96M95 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC42Q96M95 AL162373.1-201ENST00000620433 407 ntBASIC2.07□□□□□ -2.08
CCDC42Q96M95 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC42Q96M95 AL354685.2-201ENST00000448218 1447 ntBASIC2.07□□□□□ -2.08
CCDC42Q96M95 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
CCDC42Q96M95 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC42Q96M95 RNU6-1005P-201ENST00000384519 107 ntBASIC2.06□□□□□ -2.08
CCDC42Q96M95 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC42Q96M95 RNU2-15P-201ENST00000410692 191 ntBASIC2.06□□□□□ -2.08
CCDC42Q96M95 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC42Q96M95 Z85995.1-201ENST00000415547 335 ntBASIC2.06□□□□□ -2.08
CCDC42Q96M95 AL135786.1-201ENST00000415892 214 ntBASIC2.06□□□□□ -2.08
CCDC42Q96M95 SPA17P1-201ENST00000416656 452 ntBASIC2.06□□□□□ -2.08
CCDC42Q96M95 HMGN2P19-201ENST00000425149 265 ntBASIC2.06□□□□□ -2.08
CCDC42Q96M95 USP12PX-201ENST00000432383 1057 ntBASIC2.06□□□□□ -2.08
CCDC42Q96M95 AL512844.2-201ENST00000433990 593 ntBASIC2.06□□□□□ -2.08
CCDC42Q96M95 MTCYBP45-201ENST00000435243 565 ntBASIC2.06□□□□□ -2.08
CCDC42Q96M95 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.06□□□□□ -2.08
CCDC42Q96M95 ARF4P4-201ENST00000439608 520 ntBASIC2.06□□□□□ -2.08
CCDC42Q96M95 AC092170.1-201ENST00000440211 356 ntBASIC2.06□□□□□ -2.08
CCDC42Q96M95 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC42Q96M95 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.06□□□□□ -2.08
CCDC42Q96M95 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.06□□□□□ -2.08
CCDC42Q96M95 ANKRD26P4-201ENST00000455755 950 ntBASIC2.06□□□□□ -2.08
CCDC42Q96M95 AC128713.1-201ENST00000471495 306 ntBASIC2.06□□□□□ -2.08
CCDC42Q96M95 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC42Q96M95 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
CCDC42Q96M95 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC42Q96M95 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC42Q96M95 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC42Q96M95 AC087276.1-201ENST00000529659 480 ntBASIC2.06□□□□□ -2.08
CCDC42Q96M95 AC124293.1-201ENST00000530034 493 ntBASIC2.06□□□□□ -2.08
CCDC42Q96M95 SETP7-201ENST00000552169 453 ntBASIC2.06□□□□□ -2.08
CCDC42Q96M95 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.06□□□□□ -2.08
CCDC42Q96M95 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC42Q96M95 HSPE1P3-201ENST00000559254 309 ntBASIC2.06□□□□□ -2.08
CCDC42Q96M95 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC42Q96M95 BNIP3P22-201ENST00000593399 556 ntBASIC2.06□□□□□ -2.08
CCDC42Q96M95 AC008749.1-201ENST00000597650 306 ntBASIC2.06□□□□□ -2.08
CCDC42Q96M95 AL355802.4-201ENST00000607635 548 ntBASIC2.06□□□□□ -2.08
CCDC42Q96M95 AL449363.1-201ENST00000617815 186 ntBASIC2.06□□□□□ -2.08
CCDC42Q96M95 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.06□□□□□ -2.08
CCDC42Q96M95 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC42Q96M95 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC42Q96M95 AC131280.1-202ENST00000624067 4211 ntBASIC2.06□□□□□ -2.08
CCDC42Q96M95 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC42Q96M95 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC42Q96M95 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC42Q96M95 XGY1-201ENST00000381172 446 ntBASIC2.05□□□□□ -2.08
CCDC42Q96M95 MIR135A2-201ENST00000384854 100 ntBASIC2.05□□□□□ -2.08
CCDC42Q96M95 MIR17-201ENST00000385012 84 ntBASIC2.05□□□□□ -2.08
CCDC42Q96M95 AL035405.1-201ENST00000400795 710 ntBASIC2.05□□□□□ -2.08
CCDC42Q96M95 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.05□□□□□ -2.08
CCDC42Q96M95 RNU2-20P-201ENST00000410425 191 ntBASIC2.05□□□□□ -2.08
CCDC42Q96M95 NPM1P11-201ENST00000417106 855 ntBASIC2.05□□□□□ -2.08
CCDC42Q96M95 AC007560.1-201ENST00000426912 237 ntBASIC2.05□□□□□ -2.08
CCDC42Q96M95 TPTE2P1-204ENST00000435256 593 ntBASIC2.05□□□□□ -2.08
CCDC42Q96M95 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC42Q96M95 AL451074.3-201ENST00000437709 472 ntBASIC2.05□□□□□ -2.08
CCDC42Q96M95 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC42Q96M95 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC42Q96M95 RNA5SP233-201ENST00000459153 113 ntBASIC2.05□□□□□ -2.08
CCDC42Q96M95 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC42Q96M95 CABYRP1-201ENST00000465493 1045 ntBASIC2.05□□□□□ -2.08
CCDC42Q96M95 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC42Q96M95 AL049873.1-201ENST00000480540 376 ntBASIC2.05□□□□□ -2.08
CCDC42Q96M95 AC011352.3-201ENST00000505162 593 ntBASIC2.05□□□□□ -2.08
CCDC42Q96M95 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC42Q96M95 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.05□□□□□ -2.08
CCDC42Q96M95 SCARNA11.3-201ENST00000517276 130 ntBASIC2.05□□□□□ -2.08
CCDC42Q96M95 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC42Q96M95 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC42Q96M95 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC42Q96M95 TRAV11-201ENST00000539512 339 ntBASIC2.05□□□□□ -2.08
CCDC42Q96M95 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC42Q96M95 AC011611.5-201ENST00000552477 578 ntBASIC2.05□□□□□ -2.08
CCDC42Q96M95 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC42Q96M95 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC42Q96M95 AC106782.4-201ENST00000568264 210 ntBASIC2.05□□□□□ -2.08
CCDC42Q96M95 MIR1273D-201ENST00000577266 86 ntBASIC2.05□□□□□ -2.08
CCDC42Q96M95 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC42Q96M95 AC012493.3-201ENST00000604494 112 ntBASIC2.05□□□□□ -2.08
CCDC42Q96M95 AL592148.2-201ENST00000612210 372 ntBASIC2.05□□□□□ -2.08
CCDC42Q96M95 AC011330.2-201ENST00000621680 635 ntBASIC2.05□□□□□ -2.08
CCDC42Q96M95 YWHAEP7-203ENST00000622054 312 ntBASIC2.05□□□□□ -2.08
CCDC42Q96M95 AC091932.3-201ENST00000624223 323 ntBASIC2.05□□□□□ -2.08
CCDC42Q96M95 CCT4P2-201ENST00000233836 1548 ntBASIC2.05□□□□□ -2.08
CCDC42Q96M95 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC42Q96M95 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC42Q96M95 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC42Q96M95 RNU6-115P-201ENST00000364310 107 ntBASIC2.04□□□□□ -2.08
CCDC42Q96M95 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC42Q96M95 RNU2-43P-201ENST00000410306 190 ntBASIC2.04□□□□□ -2.08
CCDC42Q96M95 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.04□□□□□ -2.08
CCDC42Q96M95 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC42Q96M95 NDUFB4P7-201ENST00000423198 363 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms