Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.85□□□□□ -1.95
USP47Q96K76 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.85□□□□□ -1.95
USP47Q96K76 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.85□□□□□ -1.95
USP47Q96K76 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.85□□□□□ -1.95
USP47Q96K76 AC084824.5-201ENST00000612009 413 ntBASIC2.85□□□□□ -1.95
USP47Q96K76 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
USP47Q96K76 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
USP47Q96K76 HMGB1P5-201ENST00000255320 642 ntBASIC2.84□□□□□ -1.96
USP47Q96K76 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
USP47Q96K76 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
USP47Q96K76 SNORD51-201ENST00000384320 80 ntBASIC2.84□□□□□ -1.96
USP47Q96K76 RNU6-1300P-201ENST00000391046 108 ntBASIC2.84□□□□□ -1.96
USP47Q96K76 RPS15AP38-201ENST00000413110 372 ntBASIC2.84□□□□□ -1.96
USP47Q96K76 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.84□□□□□ -1.96
USP47Q96K76 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC2.84□□□□□ -1.96
USP47Q96K76 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.84□□□□□ -1.96
USP47Q96K76 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.84□□□□□ -1.96
USP47Q96K76 AC092634.2-201ENST00000428146 1010 ntBASIC2.84□□□□□ -1.96
USP47Q96K76 PSMA6P3-201ENST00000428242 164 ntBASIC2.84□□□□□ -1.96
USP47Q96K76 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.84□□□□□ -1.96
USP47Q96K76 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.84□□□□□ -1.96
USP47Q96K76 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.84□□□□□ -1.96
USP47Q96K76 AC007677.1-201ENST00000445757 515 ntBASIC2.84□□□□□ -1.96
USP47Q96K76 AL021397.1-201ENST00000451806 248 ntBASIC2.84□□□□□ -1.96
USP47Q96K76 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.84□□□□□ -1.96
USP47Q96K76 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
USP47Q96K76 RPL38P4-201ENST00000502376 214 ntBASIC2.84□□□□□ -1.96
USP47Q96K76 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.84□□□□□ -1.96
USP47Q96K76 AC098799.2-201ENST00000509466 868 ntBASIC2.84□□□□□ -1.96
USP47Q96K76 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.84□□□□□ -1.96
USP47Q96K76 AP003355.1-201ENST00000518956 587 ntBASIC2.84□□□□□ -1.96
USP47Q96K76 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.84□□□□□ -1.96
USP47Q96K76 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.84□□□□□ -1.96
USP47Q96K76 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.84□□□□□ -1.96
USP47Q96K76 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.84□□□□□ -1.96
USP47Q96K76 AC091946.2-201ENST00000606105 291 ntBASIC2.84□□□□□ -1.96
USP47Q96K76 AL583856.2-201ENST00000606298 543 ntBASIC2.84□□□□□ -1.96
USP47Q96K76 AP002907.1-201ENST00000606361 1430 ntBASIC2.84□□□□□ -1.96
USP47Q96K76 AC009570.1-201ENST00000609599 745 ntBASIC2.84□□□□□ -1.96
USP47Q96K76 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.84□□□□□ -1.96
USP47Q96K76 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.83□□□□□ -1.96
USP47Q96K76 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
USP47Q96K76 RNA5SP338-201ENST00000410495 85 ntBASIC2.83□□□□□ -1.96
USP47Q96K76 RNU2-47P-201ENST00000410649 186 ntBASIC2.83□□□□□ -1.96
USP47Q96K76 SSXP9-201ENST00000417503 292 ntBASIC2.83□□□□□ -1.96
USP47Q96K76 RPL7P30-201ENST00000420888 709 ntBASIC2.83□□□□□ -1.96
USP47Q96K76 UBE2V1P6-201ENST00000430840 422 ntBASIC2.83□□□□□ -1.96
USP47Q96K76 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.83□□□□□ -1.96
USP47Q96K76 CBWD4P-201ENST00000445695 655 ntBASIC2.83□□□□□ -1.96
USP47Q96K76 OR6K5P-201ENST00000447050 945 ntBASIC2.83□□□□□ -1.96
USP47Q96K76 VN1R10P-201ENST00000447106 875 ntBASIC2.83□□□□□ -1.96
USP47Q96K76 AC017099.1-201ENST00000448261 1028 ntBASIC2.83□□□□□ -1.96
USP47Q96K76 RNU6-717P-201ENST00000459076 104 ntBASIC2.83□□□□□ -1.96
USP47Q96K76 AC092757.1-201ENST00000467293 467 ntBASIC2.83□□□□□ -1.96
USP47Q96K76 AC104472.2-201ENST00000469035 601 ntBASIC2.83□□□□□ -1.96
USP47Q96K76 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.83□□□□□ -1.96
USP47Q96K76 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.83□□□□□ -1.96
USP47Q96K76 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.83□□□□□ -1.96
USP47Q96K76 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.83□□□□□ -1.96
USP47Q96K76 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.83□□□□□ -1.96
USP47Q96K76 AC011494.1-201ENST00000596454 237 ntBASIC2.83□□□□□ -1.96
USP47Q96K76 MTATP6P2-201ENST00000603319 678 ntBASIC2.83□□□□□ -1.96
USP47Q96K76 AL022099.1-201ENST00000604551 712 ntBASIC2.83□□□□□ -1.96
USP47Q96K76 AC006927.2-201ENST00000639256 389 ntBASIC2.83□□□□□ -1.96
USP47Q96K76 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
USP47Q96K76 Z82195.2-201ENST00000612348 18351 ntBASIC2.82□□□□□ -1.96
USP47Q96K76 RNU6-173P-201ENST00000364215 104 ntBASIC2.82□□□□□ -1.96
USP47Q96K76 AL603865.2-201ENST00000401679 213 ntBASIC2.82□□□□□ -1.96
USP47Q96K76 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.82□□□□□ -1.96
USP47Q96K76 RPL7P54-201ENST00000438336 674 ntBASIC2.82□□□□□ -1.96
USP47Q96K76 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.82□□□□□ -1.96
USP47Q96K76 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.82□□□□□ -1.96
USP47Q96K76 AC244505.3-201ENST00000454598 187 ntBASIC2.82□□□□□ -1.96
USP47Q96K76 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.82□□□□□ -1.96
USP47Q96K76 AC010625.1-201ENST00000511296 403 ntBASIC2.82□□□□□ -1.96
USP47Q96K76 SNORA31.11-201ENST00000516528 139 ntBASIC2.82□□□□□ -1.96
USP47Q96K76 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.82□□□□□ -1.96
USP47Q96K76 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.82□□□□□ -1.96
USP47Q96K76 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.82□□□□□ -1.96
USP47Q96K76 AP001004.1-201ENST00000582468 324 ntBASIC2.82□□□□□ -1.96
USP47Q96K76 AC106791.2-201ENST00000604680 391 ntBASIC2.82□□□□□ -1.96
USP47Q96K76 AP001521.1-201ENST00000609150 300 ntBASIC2.82□□□□□ -1.96
USP47Q96K76 MIR6845-201ENST00000613182 61 ntBASIC2.82□□□□□ -1.96
USP47Q96K76 AC008759.3-201ENST00000613300 508 ntBASIC2.82□□□□□ -1.96
USP47Q96K76 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
USP47Q96K76 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.82□□□□□ -1.96
USP47Q96K76 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.82□□□□□ -1.96
USP47Q96K76 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
USP47Q96K76 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.82□□□□□ -1.96
USP47Q96K76 AC080128.1-201ENST00000474389 1917 ntBASIC2.81□□□□□ -1.96
USP47Q96K76 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
USP47Q96K76 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
USP47Q96K76 RNU5B-4P-201ENST00000363508 111 ntBASIC2.81□□□□□ -1.96
USP47Q96K76 Y_RNA.164-201ENST00000363709 102 ntBASIC2.81□□□□□ -1.96
USP47Q96K76 RNU6-878P-201ENST00000384578 110 ntBASIC2.81□□□□□ -1.96
USP47Q96K76 MIR493-201ENST00000385254 89 ntBASIC2.81□□□□□ -1.96
USP47Q96K76 AL136372.1-201ENST00000403060 228 ntBASIC2.81□□□□□ -1.96
USP47Q96K76 RNA5SP38-201ENST00000410750 119 ntBASIC2.81□□□□□ -1.96
USP47Q96K76 BTF3P8-201ENST00000414577 526 ntBASIC2.81□□□□□ -1.96
USP47Q96K76 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms