Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 THAP5P1-201ENST00000439089 262 ntBASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 AL714022.1-201ENST00000439897 151 ntBASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 SDCBPP1-201ENST00000440192 890 ntBASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 RPL18AP17-201ENST00000455326 198 ntBASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 MTND4LP3-201ENST00000468320 276 ntBASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 AC116337.2-201ENST00000477662 156 ntBASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 AC016550.1-201ENST00000505348 785 ntBASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 SNORA31.15-201ENST00000516771 132 ntBASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 RNU6-528P-201ENST00000516926 100 ntBASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 RNA5SP471-201ENST00000516971 106 ntBASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 AC007621.1-201ENST00000604544 437 ntBASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 AC004852.3-201ENST00000614131 326 ntBASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 AC002550.2-201ENST00000621246 394 ntBASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 AC104985.3-201ENST00000623479 597 ntBASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 AC006378.2-201ENST00000623178 2476 ntBASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 AL356473.1-201ENST00000406203 1408 ntBASIC2.49□□□□□ -2.01
ECHDC3Q96DC8 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 RNU6-343P-201ENST00000364709 104 ntBASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 RNU1-138P-201ENST00000384093 164 ntBASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 SNORA40.2-201ENST00000390847 128 ntBASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 MRPS36P1-201ENST00000421291 307 ntBASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 AC009414.1-201ENST00000427200 443 ntBASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 AC009237.8-201ENST00000445492 379 ntBASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 AC133134.1-201ENST00000466800 359 ntBASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 AC093752.1-206ENST00000511823 336 ntBASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 RNU6-583P-201ENST00000516012 92 ntBASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 AL022067.1-201ENST00000602426 454 ntBASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 AP001429.1-201ENST00000602568 530 ntBASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 DUXAP3-201ENST00000603616 594 ntBASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 AL049779.4-201ENST00000604500 156 ntBASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 AC245517.5-201ENST00000611529 162 ntBASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 AL357080.1-201ENST00000617394 239 ntBASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 AL445264.1-201ENST00000621719 171 ntBASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 Z82195.2-201ENST00000612348 18351 ntBASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 AL359693.1-201ENST00000614959 2407 ntBASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.48□□□□□ -2.01
ECHDC3Q96DC8 SDAD1P2-201ENST00000441308 2028 ntBASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 RNU4-82P-201ENST00000362443 140 ntBASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 SET-203ENST00000372688 801 ntTSL 2 BASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 XGY1-201ENST00000381172 446 ntBASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 MIR767-201ENST00000390228 109 ntBASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 SNORD121B-201ENST00000458838 81 ntBASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 RPL23AP45-201ENST00000476406 468 ntBASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 AC108734.3-201ENST00000481241 1165 ntBASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 RPL36AP51-201ENST00000487216 318 ntBASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 MTCYBP17-201ENST00000503579 789 ntBASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 RPL37P25-201ENST00000507308 276 ntBASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 SCARNA15.2-201ENST00000516409 127 ntBASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 RNU6-1282P-201ENST00000516735 96 ntBASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 RNU6-928P-201ENST00000516876 104 ntBASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 AC025881.1-201ENST00000518851 512 ntBASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 AP001646.1-201ENST00000527936 915 ntBASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 AL132857.1-201ENST00000555180 708 ntBASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 AC104072.1-201ENST00000568817 668 ntBASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 AC010546.1-201ENST00000569391 485 ntBASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 RPL23AP84-201ENST00000571193 464 ntBASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 AC009163.5-201ENST00000575421 637 ntBASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 AC090615.1-201ENST00000577519 154 ntBASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 FO624990.1-201ENST00000636373 85 ntBASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.47□□□□□ -2.01
ECHDC3Q96DC8 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
ECHDC3Q96DC8 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms