Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 RNU6-1155P-201ENST00000363554 107 ntBASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 SNORA70.10-201ENST00000384515 134 ntBASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 USMG5P1-201ENST00000425964 177 ntBASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 USP9YP16-201ENST00000430287 407 ntBASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 AC090774.1-201ENST00000435925 246 ntBASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 AC004866.2-201ENST00000438285 481 ntBASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 AL359672.1-201ENST00000442302 409 ntBASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 USP9YP23-201ENST00000455085 407 ntBASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 U8.20-201ENST00000459445 131 ntBASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 AC091180.1-201ENST00000462104 372 ntBASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 AC073073.1-201ENST00000493920 463 ntBASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 AC009901.1-201ENST00000506703 541 ntBASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 RNU6-1095P-201ENST00000516148 108 ntBASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 AC009643.1-201ENST00000532030 391 ntBASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 AL020997.2-201ENST00000602607 184 ntBASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 AC104763.2-201ENST00000604179 382 ntBASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 AL161423.1-201ENST00000613700 262 ntBASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 MFSD8-216ENST00000641147 4009 ntBASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 AC005592.1-201ENST00000566527 1640 ntBASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 RNU6-238P-201ENST00000363313 106 ntBASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 RNU6-1303P-201ENST00000364841 107 ntBASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 SNORA2.3-201ENST00000383920 135 ntBASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 AC009310.1-201ENST00000414414 451 ntBASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 AL137014.1-201ENST00000420490 1226 ntBASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 RPL18P10-201ENST00000425606 538 ntBASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 RPS27AP12-201ENST00000429552 465 ntBASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 NOTCH2P1-201ENST00000443481 624 ntBASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 MTND4LP22-201ENST00000508209 276 ntBASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 AC096745.1-201ENST00000509945 370 ntBASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 RNU6-352P-201ENST00000516908 107 ntBASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.57□□□□□ -1.52
VTI1AQ96AJ9 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.56□□□□□ -1.52
VTI1AQ96AJ9 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VTI1AQ96AJ9 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VTI1AQ96AJ9 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.56□□□□□ -1.52
VTI1AQ96AJ9 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VTI1AQ96AJ9 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VTI1AQ96AJ9 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VTI1AQ96AJ9 AL035079.1-201ENST00000405210 287 ntBASIC5.56□□□□□ -1.52
VTI1AQ96AJ9 RN7SKP106-201ENST00000410832 272 ntBASIC5.56□□□□□ -1.52
VTI1AQ96AJ9 DPH3P2-201ENST00000422618 250 ntBASIC5.56□□□□□ -1.52
VTI1AQ96AJ9 PPP1R11P2-201ENST00000423543 382 ntBASIC5.56□□□□□ -1.52
VTI1AQ96AJ9 AL160275.3-201ENST00000423876 471 ntBASIC5.56□□□□□ -1.52
VTI1AQ96AJ9 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.56□□□□□ -1.52
VTI1AQ96AJ9 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.56□□□□□ -1.52
VTI1AQ96AJ9 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.56□□□□□ -1.52
VTI1AQ96AJ9 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.56□□□□□ -1.52
VTI1AQ96AJ9 AC116655.1-201ENST00000508324 901 ntBASIC5.56□□□□□ -1.52
VTI1AQ96AJ9 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.56□□□□□ -1.52
VTI1AQ96AJ9 RNU6-677P-201ENST00000516914 101 ntBASIC5.56□□□□□ -1.52
VTI1AQ96AJ9 SNORD116.3-201ENST00000517176 78 ntBASIC5.56□□□□□ -1.52
VTI1AQ96AJ9 NDUFB4P11-201ENST00000560510 395 ntBASIC5.56□□□□□ -1.52
VTI1AQ96AJ9 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.56□□□□□ -1.52
VTI1AQ96AJ9 AC012119.1-201ENST00000603184 222 ntBASIC5.56□□□□□ -1.52
VTI1AQ96AJ9 AC002044.1-201ENST00000606707 158 ntBASIC5.56□□□□□ -1.52
VTI1AQ96AJ9 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.56□□□□□ -1.52
VTI1AQ96AJ9 AC019206.1-201ENST00000621938 425 ntBASIC5.56□□□□□ -1.52
VTI1AQ96AJ9 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.56□□□□□ -1.52
VTI1AQ96AJ9 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.56□□□□□ -1.52
VTI1AQ96AJ9 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms