Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 RNU6-347P-201ENST00000516658 105 ntBASIC8.22□□□□□ -1.09
TRIM41Q8WV44 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC8.22□□□□□ -1.09
TRIM41Q8WV44 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC8.22□□□□□ -1.09
TRIM41Q8WV44 SUB1P3-201ENST00000564581 315 ntBASIC8.22□□□□□ -1.09
TRIM41Q8WV44 MIR3910-1-201ENST00000580936 111 ntBASIC8.22□□□□□ -1.09
TRIM41Q8WV44 AC039056.2-201ENST00000622261 511 ntBASIC8.22□□□□□ -1.09
TRIM41Q8WV44 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
TRIM41Q8WV44 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC8.22□□□□□ -1.09
TRIM41Q8WV44 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
TRIM41Q8WV44 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
TRIM41Q8WV44 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC8.22□□□□□ -1.09
TRIM41Q8WV44 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
TRIM41Q8WV44 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC8.22□□□□□ -1.09
TRIM41Q8WV44 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
TRIM41Q8WV44 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
TRIM41Q8WV44 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
TRIM41Q8WV44 AP005432.1-201ENST00000580891 3485 ntBASIC8.21□□□□□ -1.09
TRIM41Q8WV44 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
TRIM41Q8WV44 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
TRIM41Q8WV44 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC8.21□□□□□ -1.1
TRIM41Q8WV44 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
TRIM41Q8WV44 RNY3P11-201ENST00000364153 102 ntBASIC8.21□□□□□ -1.1
TRIM41Q8WV44 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
TRIM41Q8WV44 AL645608.4-201ENST00000423619 154 ntBASIC8.21□□□□□ -1.1
TRIM41Q8WV44 PSMA2P3-201ENST00000429685 675 ntBASIC8.21□□□□□ -1.1
TRIM41Q8WV44 AL353997.1-201ENST00000432936 108 ntBASIC8.21□□□□□ -1.1
TRIM41Q8WV44 AL359672.1-201ENST00000442302 409 ntBASIC8.21□□□□□ -1.1
TRIM41Q8WV44 RPL23AP24-201ENST00000458203 385 ntBASIC8.21□□□□□ -1.1
TRIM41Q8WV44 RPL7P5-201ENST00000471472 736 ntBASIC8.21□□□□□ -1.1
TRIM41Q8WV44 AC135721.1-201ENST00000497954 479 ntBASIC8.21□□□□□ -1.1
TRIM41Q8WV44 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC8.21□□□□□ -1.1
TRIM41Q8WV44 MTCO3P44-201ENST00000510977 541 ntBASIC8.21□□□□□ -1.1
TRIM41Q8WV44 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC8.21□□□□□ -1.1
TRIM41Q8WV44 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC8.21□□□□□ -1.1
TRIM41Q8WV44 RAC1P9-201ENST00000604990 392 ntBASIC8.21□□□□□ -1.1
TRIM41Q8WV44 HMGN2P28-201ENST00000606102 262 ntBASIC8.21□□□□□ -1.1
TRIM41Q8WV44 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
TRIM41Q8WV44 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
TRIM41Q8WV44 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC8.2□□□□□ -1.1
TRIM41Q8WV44 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC8.2□□□□□ -1.1
TRIM41Q8WV44 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
TRIM41Q8WV44 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC8.2□□□□□ -1.1
TRIM41Q8WV44 Y_RNA.276-201ENST00000364732 109 ntBASIC8.2□□□□□ -1.1
TRIM41Q8WV44 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
TRIM41Q8WV44 RNU6-946P-201ENST00000383878 107 ntBASIC8.2□□□□□ -1.1
TRIM41Q8WV44 AL139039.1-201ENST00000401900 692 ntBASIC8.2□□□□□ -1.1
TRIM41Q8WV44 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC8.2□□□□□ -1.1
TRIM41Q8WV44 RPS17P13-201ENST00000448974 407 ntBASIC8.2□□□□□ -1.1
TRIM41Q8WV44 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC8.2□□□□□ -1.1
TRIM41Q8WV44 RN7SL432P-201ENST00000484057 298 ntBASIC8.2□□□□□ -1.1
TRIM41Q8WV44 SNORA40.14-201ENST00000516543 86 ntBASIC8.2□□□□□ -1.1
TRIM41Q8WV44 STX3-204ENST00000530221 534 ntTSL 5 BASIC8.2□□□□□ -1.1
TRIM41Q8WV44 RN7SL435P-201ENST00000584418 282 ntBASIC8.2□□□□□ -1.1
TRIM41Q8WV44 PSMA6P4-201ENST00000603247 718 ntBASIC8.2□□□□□ -1.1
TRIM41Q8WV44 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC8.2□□□□□ -1.1
TRIM41Q8WV44 AL031176.1-201ENST00000604554 466 ntBASIC8.2□□□□□ -1.1
TRIM41Q8WV44 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
TRIM41Q8WV44 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC8.2□□□□□ -1.1
TRIM41Q8WV44 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC8.2□□□□□ -1.1
TRIM41Q8WV44 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TRIM41Q8WV44 MAPK10-304ENST00000641341 3984 ntBASIC8.19□□□□□ -1.1
TRIM41Q8WV44 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC8.19□□□□□ -1.1
TRIM41Q8WV44 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TRIM41Q8WV44 Y_RNA.785-201ENST00000384290 109 ntBASIC8.19□□□□□ -1.1
TRIM41Q8WV44 AP000580.1-201ENST00000404439 358 ntBASIC8.19□□□□□ -1.1
TRIM41Q8WV44 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC8.19□□□□□ -1.1
TRIM41Q8WV44 VTI1BP4-201ENST00000427516 527 ntBASIC8.19□□□□□ -1.1
TRIM41Q8WV44 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC8.19□□□□□ -1.1
TRIM41Q8WV44 AC127537.2-201ENST00000439258 465 ntBASIC8.19□□□□□ -1.1
TRIM41Q8WV44 NOTCH2P1-201ENST00000443481 624 ntBASIC8.19□□□□□ -1.1
TRIM41Q8WV44 AL031274.1-201ENST00000450334 232 ntBASIC8.19□□□□□ -1.1
TRIM41Q8WV44 RNU6-1218P-201ENST00000458990 108 ntBASIC8.19□□□□□ -1.1
TRIM41Q8WV44 AC084198.1-201ENST00000477747 402 ntBASIC8.19□□□□□ -1.1
TRIM41Q8WV44 SCARNA22-201ENST00000503991 125 ntBASIC8.19□□□□□ -1.1
TRIM41Q8WV44 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC8.19□□□□□ -1.1
TRIM41Q8WV44 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC8.19□□□□□ -1.1
TRIM41Q8WV44 AC022726.1-201ENST00000587475 207 ntBASIC8.19□□□□□ -1.1
TRIM41Q8WV44 HMGB2P1-201ENST00000591146 634 ntBASIC8.19□□□□□ -1.1
TRIM41Q8WV44 AL023881.1-201ENST00000621088 301 ntBASIC8.19□□□□□ -1.1
TRIM41Q8WV44 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC8.19□□□□□ -1.1
TRIM41Q8WV44 EIF2AP4-201ENST00000424793 1781 ntBASIC8.19□□□□□ -1.1
TRIM41Q8WV44 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TRIM41Q8WV44 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TRIM41Q8WV44 OSBPL9P4-201ENST00000371707 1800 ntBASIC8.19□□□□□ -1.1
TRIM41Q8WV44 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
TRIM41Q8WV44 AC116096.1-201ENST00000566804 2314 ntBASIC8.18□□□□□ -1.1
TRIM41Q8WV44 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRIM41Q8WV44 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRIM41Q8WV44 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
TRIM41Q8WV44 Y_RNA.180-201ENST00000363867 113 ntBASIC8.18□□□□□ -1.1
TRIM41Q8WV44 RNA5SP283-201ENST00000365604 119 ntBASIC8.18□□□□□ -1.1
TRIM41Q8WV44 AC114755.2-201ENST00000413520 361 ntBASIC8.18□□□□□ -1.1
TRIM41Q8WV44 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC8.18□□□□□ -1.1
TRIM41Q8WV44 AMMECR1LP1-201ENST00000415152 841 ntBASIC8.18□□□□□ -1.1
TRIM41Q8WV44 RPL7P2-201ENST00000427639 268 ntBASIC8.18□□□□□ -1.1
TRIM41Q8WV44 AL158071.1-201ENST00000430315 461 ntBASIC8.18□□□□□ -1.1
TRIM41Q8WV44 RN7SL517P-201ENST00000462240 305 ntBASIC8.18□□□□□ -1.1
TRIM41Q8WV44 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC8.18□□□□□ -1.1
TRIM41Q8WV44 AC110768.1-201ENST00000509222 400 ntBASIC8.18□□□□□ -1.1
TRIM41Q8WV44 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms