Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.15□□□□□ -2.07
SHROOM3Q8TF72 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.15□□□□□ -2.07
SHROOM3Q8TF72 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.15□□□□□ -2.07
SHROOM3Q8TF72 AC091951.3-201ENST00000504093 246 ntBASIC2.15□□□□□ -2.07
SHROOM3Q8TF72 RNU6-295P-201ENST00000516901 104 ntBASIC2.15□□□□□ -2.07
SHROOM3Q8TF72 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.15□□□□□ -2.07
SHROOM3Q8TF72 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.15□□□□□ -2.07
SHROOM3Q8TF72 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.15□□□□□ -2.07
SHROOM3Q8TF72 SNRPGP18-201ENST00000553000 214 ntBASIC2.15□□□□□ -2.07
SHROOM3Q8TF72 AL512347.1-201ENST00000566420 503 ntBASIC2.15□□□□□ -2.07
SHROOM3Q8TF72 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.15□□□□□ -2.07
SHROOM3Q8TF72 AC011890.2-201ENST00000613393 294 ntBASIC2.15□□□□□ -2.07
SHROOM3Q8TF72 AC084824.4-201ENST00000620106 731 ntBASIC2.15□□□□□ -2.07
SHROOM3Q8TF72 AL109809.4-201ENST00000603520 2185 ntBASIC2.15□□□□□ -2.07
SHROOM3Q8TF72 PABPC1P7-201ENST00000413177 1513 ntBASIC2.15□□□□□ -2.07
SHROOM3Q8TF72 AC010733.2-201ENST00000589496 5702 ntBASIC2.15□□□□□ -2.07
SHROOM3Q8TF72 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
SHROOM3Q8TF72 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.15□□□□□ -2.07
SHROOM3Q8TF72 RNU6-582P-201ENST00000362989 107 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 RNY1P10-201ENST00000363268 113 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 RNA5SP138-201ENST00000365098 114 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 RNU6-657P-201ENST00000383904 107 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AF274854.1-201ENST00000413236 615 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC005345.1-201ENST00000431868 217 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 GTF2IP3-201ENST00000433887 494 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC004866.2-201ENST00000438285 481 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 MTCYBP42-201ENST00000444653 1130 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 COX6CP18-201ENST00000448769 222 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC109486.1-201ENST00000486833 374 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 RNU6-415P-201ENST00000516252 97 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC092470.1-201ENST00000546187 132 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC002984.1-201ENST00000591692 448 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 VN1R83P-201ENST00000595685 445 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC091057.2-201ENST00000602594 792 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC105148.1-201ENST00000604961 409 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC009237.15-201ENST00000610252 501 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC025263.3-201ENST00000622965 1396 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 MTND5P28-201ENST00000438005 1594 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 VTRNA1-1-201ENST00000363120 99 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 RNU6-1066P-201ENST00000363573 105 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 Y_RNA.311-201ENST00000365068 96 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 RNU6-921P-201ENST00000384361 107 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 RPL23AP47-201ENST00000408017 460 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 SNORA11.4-201ENST00000408823 129 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AL513331.1-201ENST00000411908 397 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 RPL30P3-201ENST00000424262 333 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AL035410.1-201ENST00000427409 427 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AL358794.1-201ENST00000445689 381 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 NDUFA5P7-201ENST00000452914 242 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC010301.1-201ENST00000473936 355 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 RNF138P1-201ENST00000502765 546 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC118282.2-201ENST00000508739 374 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC109471.1-201ENST00000511631 612 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC022022.2-201ENST00000602989 360 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC024060.1-201ENST00000607052 494 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC103710.1-201ENST00000610003 901 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC121761.2-201ENST00000617300 689 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 AC010378.1-201ENST00000619270 362 ntBASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SHROOM3Q8TF72 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 AC027514.1-201ENST00000588561 1603 ntBASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 RNU6-839P-201ENST00000363347 108 ntBASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 RNU6-549P-201ENST00000384433 107 ntBASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 RPL31P2-201ENST00000413849 377 ntBASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 MTCYBP24-201ENST00000420387 1106 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms