Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 OR1S2-201ENST00000302592 978 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 Y_RNA.598-201ENST00000410480 95 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 RNU6-248P-201ENST00000410720 107 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 RPL21P32-201ENST00000419877 477 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 USP9YP14-201ENST00000430663 563 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 HMGB1P12-201ENST00000438594 598 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AC107083.1-201ENST00000439643 279 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AL049734.2-201ENST00000441066 616 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AC025750.2-201ENST00000442609 450 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 TPT1P14-201ENST00000448018 505 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 SSXP1-201ENST00000453640 473 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AP1S2P1-201ENST00000457344 379 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 RPS4XP2-201ENST00000458402 793 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 RPS4XP13-201ENST00000483219 789 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 NIPA2P2-201ENST00000496376 1083 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AC112204.1-201ENST00000502591 103 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 ARL2BPP4-201ENST00000506854 471 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 NDUFB4P9-201ENST00000511646 388 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 RNU6-798P-201ENST00000516912 103 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AC022616.6-201ENST00000520479 119 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AP002963.1-201ENST00000530590 184 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AC022878.1-201ENST00000530684 149 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 H3F3AP1-201ENST00000559984 334 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AL157394.1-201ENST00000562983 1224 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 MIR4738-201ENST00000579134 87 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 MTND1P15-201ENST00000579262 949 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AC005771.1-201ENST00000585581 349 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 BNIP3P8-201ENST00000597863 560 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AC090425.2-201ENST00000608818 501 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AC006566.1-201ENST00000608943 513 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 OR10AB1P-201ENST00000609613 938 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AP000254.1-201ENST00000609934 520 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AC012531.5-201ENST00000611375 151 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AC131902.3-201ENST00000611767 581 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AC100793.4-201ENST00000613683 429 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AC008250.2-201ENST00000615261 205 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 U7.8-201ENST00000619968 63 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AC099506.2-201ENST00000623074 221 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 RIOK3P1-201ENST00000418778 1528 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AC009902.3-201ENST00000606235 2172 ntBASIC2.5□□□□□ -2.01
LINC01006Q8NI28 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
LINC01006Q8NI28 AC011460.1-201ENST00000636268 1834 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 RNU6-1119P-201ENST00000384349 108 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 AL137014.1-201ENST00000420490 1226 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 RPL23AP82-202ENST00000427528 469 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 PGBD4P3-201ENST00000440731 581 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 RAC1P7-201ENST00000445367 377 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 SNORD42A-201ENST00000459584 64 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 CENPBD1P1-201ENST00000464061 469 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC01006Q8NI28 AC055855.1-201ENST00000489563 579 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 FCF1P3-201ENST00000496394 590 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 RPL7P47-201ENST00000497299 556 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 AC096751.1-202ENST00000502691 1067 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.49□□□□□ -2.01
LINC01006Q8NI28 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms