Protein–RNA interactions for Protein: Q8NEL0

CCDC54, Coiled-coil domain-containing protein 54, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54Q8NEL0 MIR4444-2-201ENST00000584390 74 ntBASIC2.43□□□□□ -2.02
CCDC54Q8NEL0 MIR4760-201ENST00000585040 80 ntBASIC2.43□□□□□ -2.02
CCDC54Q8NEL0 AC061975.8-201ENST00000587058 721 ntBASIC2.43□□□□□ -2.02
CCDC54Q8NEL0 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC54Q8NEL0 AC013553.2-201ENST00000604244 589 ntBASIC2.43□□□□□ -2.02
CCDC54Q8NEL0 AL049779.4-201ENST00000604500 156 ntBASIC2.43□□□□□ -2.02
CCDC54Q8NEL0 BCRP9-201ENST00000605312 388 ntBASIC2.43□□□□□ -2.02
CCDC54Q8NEL0 AC090186.1-201ENST00000605991 572 ntBASIC2.43□□□□□ -2.02
CCDC54Q8NEL0 AC004067.1-201ENST00000608733 700 ntBASIC2.43□□□□□ -2.02
CCDC54Q8NEL0 AC097478.2-201ENST00000610572 514 ntBASIC2.43□□□□□ -2.02
CCDC54Q8NEL0 AC110079.1-202ENST00000635213 138 ntBASIC2.43□□□□□ -2.02
CCDC54Q8NEL0 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC54Q8NEL0 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
CCDC54Q8NEL0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
CCDC54Q8NEL0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
CCDC54Q8NEL0 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 AC087359.1-201ENST00000508335 1740 ntBASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 MIR422A-201ENST00000362286 90 ntBASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 RNU1-100P-201ENST00000365255 165 ntBASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 RNU1-39P-201ENST00000383897 165 ntBASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 MIR627-201ENST00000384979 97 ntBASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 MTCO2P21-201ENST00000419780 677 ntBASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 YME1L1P1-201ENST00000429435 297 ntBASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 AC003982.1-202ENST00000469928 248 ntBASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 AC021382.1-201ENST00000483523 359 ntBASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 RPL37P25-201ENST00000507308 276 ntBASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 AC093281.2-201ENST00000510153 597 ntBASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 AC034159.1-201ENST00000513885 583 ntBASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 AC105185.1-201ENST00000518705 535 ntBASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 AC023538.1-201ENST00000534576 736 ntBASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 AC136618.2-201ENST00000575091 400 ntBASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 MIR4446-201ENST00000578505 67 ntBASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 VN1R90P-201ENST00000595717 726 ntBASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 AC024153.1-201ENST00000603103 365 ntBASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 MIR6130-201ENST00000619419 109 ntBASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 AC012150.2-201ENST00000621300 544 ntBASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 AC008443.7-201ENST00000622195 246 ntBASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 MIR3651-201ENST00000630427 90 ntBASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC54Q8NEL0 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 AL391994.1-201ENST00000254724 282 ntBASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 FAM133CP-201ENST00000332869 704 ntBASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 RNU6-173P-201ENST00000364215 104 ntBASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 RPL27AP8-201ENST00000424277 446 ntBASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 MTCO2P17-201ENST00000424336 677 ntBASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 AC091390.3-201ENST00000426478 338 ntBASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 AL512649.1-201ENST00000428997 581 ntBASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 OR6C5P-201ENST00000452388 923 ntBASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 AC027673.1-201ENST00000456245 405 ntBASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 HSPE1P6-201ENST00000479457 291 ntBASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 RNU5A-4P-201ENST00000516588 111 ntBASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 HMGB1P41-201ENST00000520234 440 ntBASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 MTCO1P47-201ENST00000523889 1271 ntBASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 UBTFL10-201ENST00000528532 562 ntBASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 OR7K1P-201ENST00000546439 926 ntBASIC2.41□□□□□ -2.02
CCDC54Q8NEL0 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms