Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
HIPK4Q8NE63 AC090115.3-201ENST00000553218 849 ntBASIC4.29□□□□□ -1.72
HIPK4Q8NE63 AL121603.1-201ENST00000553815 142 ntBASIC4.29□□□□□ -1.72
HIPK4Q8NE63 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.29□□□□□ -1.72
HIPK4Q8NE63 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.29□□□□□ -1.72
HIPK4Q8NE63 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.29□□□□□ -1.72
HIPK4Q8NE63 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.29□□□□□ -1.72
HIPK4Q8NE63 AC174048.1-201ENST00000603389 144 ntBASIC4.29□□□□□ -1.72
HIPK4Q8NE63 DPPA3P3-201ENST00000603842 430 ntBASIC4.29□□□□□ -1.72
HIPK4Q8NE63 AP001330.4-201ENST00000604350 154 ntBASIC4.29□□□□□ -1.72
HIPK4Q8NE63 AC020634.1-201ENST00000608701 549 ntBASIC4.29□□□□□ -1.72
HIPK4Q8NE63 AC134503.1-201ENST00000633048 54 ntBASIC4.29□□□□□ -1.72
HIPK4Q8NE63 MIR4275-201ENST00000636486 87 ntBASIC4.29□□□□□ -1.72
HIPK4Q8NE63 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
HIPK4Q8NE63 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.29□□□□□ -1.72
HIPK4Q8NE63 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
HIPK4Q8NE63 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HIPK4Q8NE63 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HIPK4Q8NE63 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 RNA5SP123-201ENST00000363244 119 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 SNORD3H-201ENST00000384486 214 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 RNA5SP219-201ENST00000390940 113 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 SNORD70.1-201ENST00000391007 85 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 RNY4P36-201ENST00000391116 96 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 AL445189.1-201ENST00000405722 338 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 BTF3L4P3-201ENST00000418879 476 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 AC140479.3-201ENST00000418944 1126 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 MTCO2P27-201ENST00000420740 428 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 NRBF2P3-201ENST00000432731 865 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 BRK1P2-201ENST00000442875 223 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 AL121871.1-201ENST00000443413 436 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 AL359073.1-201ENST00000448036 403 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 AL451050.1-201ENST00000450126 415 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 AC107399.1-201ENST00000451226 265 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 AP001086.1-201ENST00000494882 321 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 AC025445.1-201ENST00000502728 300 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 HIGD1AP13-201ENST00000509878 289 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 Y_RNA.689-201ENST00000516589 107 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 RNU6-352P-201ENST00000516908 107 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 RN7SKP60-201ENST00000516985 239 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 AC135001.1-201ENST00000544546 283 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 EDDM3DP-201ENST00000554692 434 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 AC005951.2-201ENST00000576282 495 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 AL158032.1-201ENST00000605401 106 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 RNA5SP108-201ENST00000605921 117 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 Z98200.1-201ENST00000607298 470 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 SDR42E1P2-201ENST00000614861 481 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 AC068870.2-201ENST00000620635 389 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 AC018445.2-201ENST00000622987 260 ntBASIC4.28□□□□□ -1.72
HIPK4Q8NE63 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HIPK4Q8NE63 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HIPK4Q8NE63 HSPA8P4-201ENST00000511877 1920 ntBASIC4.27□□□□□ -1.73
HIPK4Q8NE63 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HIPK4Q8NE63 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HIPK4Q8NE63 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HIPK4Q8NE63 Y_RNA.212-201ENST00000364177 102 ntBASIC4.27□□□□□ -1.73
HIPK4Q8NE63 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.27□□□□□ -1.73
HIPK4Q8NE63 Y_RNA.399-201ENST00000383955 105 ntBASIC4.27□□□□□ -1.73
HIPK4Q8NE63 RNU6-190P-201ENST00000384154 102 ntBASIC4.27□□□□□ -1.73
HIPK4Q8NE63 RNU6-474P-201ENST00000384243 107 ntBASIC4.27□□□□□ -1.73
HIPK4Q8NE63 CISD1P1-201ENST00000393907 327 ntBASIC4.27□□□□□ -1.73
HIPK4Q8NE63 MIR548P-201ENST00000408336 84 ntBASIC4.27□□□□□ -1.73
HIPK4Q8NE63 AC074085.1-201ENST00000413598 418 ntBASIC4.27□□□□□ -1.73
HIPK4Q8NE63 AC119751.6-201ENST00000416712 186 ntBASIC4.27□□□□□ -1.73
HIPK4Q8NE63 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.27□□□□□ -1.73
HIPK4Q8NE63 AL669831.1-202ENST00000428504 417 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms