Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
CCDC168Q8NDH2 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.11□□□□□ -2.23
CCDC168Q8NDH2 SGO1P2-201ENST00000429458 1589 ntBASIC1.11□□□□□ -2.23
CCDC168Q8NDH2 U8.1-201ENST00000362843 134 ntBASIC1.11□□□□□ -2.23
CCDC168Q8NDH2 Y_RNA.571-201ENST00000384753 98 ntBASIC1.11□□□□□ -2.23
CCDC168Q8NDH2 HMGN2P38-201ENST00000423806 265 ntBASIC1.11□□□□□ -2.23
CCDC168Q8NDH2 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC1.11□□□□□ -2.23
CCDC168Q8NDH2 AC234775.1-201ENST00000454247 670 ntBASIC1.11□□□□□ -2.23
CCDC168Q8NDH2 AC092451.1-201ENST00000480211 153 ntBASIC1.11□□□□□ -2.23
CCDC168Q8NDH2 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC168Q8NDH2 AP003033.1-201ENST00000527244 415 ntBASIC1.11□□□□□ -2.23
CCDC168Q8NDH2 CBX3P2-202ENST00000583365 535 ntBASIC1.11□□□□□ -2.23
CCDC168Q8NDH2 AC012557.2-201ENST00000605919 418 ntBASIC1.11□□□□□ -2.23
CCDC168Q8NDH2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC168Q8NDH2 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC1.1□□□□□ -2.23
CCDC168Q8NDH2 MIRLET7G-201ENST00000362280 84 ntBASIC1.1□□□□□ -2.23
CCDC168Q8NDH2 TRAPPC2P5-201ENST00000426293 308 ntBASIC1.1□□□□□ -2.23
CCDC168Q8NDH2 CKS1BP5-201ENST00000434172 273 ntBASIC1.1□□□□□ -2.23
CCDC168Q8NDH2 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.1□□□□□ -2.23
CCDC168Q8NDH2 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC168Q8NDH2 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC168Q8NDH2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
CCDC168Q8NDH2 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.1□□□□□ -2.23
CCDC168Q8NDH2 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.1□□□□□ -2.23
CCDC168Q8NDH2 AL596028.1-201ENST00000326971 197 ntBASIC1.1□□□□□ -2.23
CCDC168Q8NDH2 SNORD48-201ENST00000364953 64 ntBASIC1.1□□□□□ -2.23
CCDC168Q8NDH2 RNU6-30P-201ENST00000384561 107 ntBASIC1.1□□□□□ -2.23
CCDC168Q8NDH2 SNORA40.6-201ENST00000391153 128 ntBASIC1.1□□□□□ -2.23
CCDC168Q8NDH2 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC168Q8NDH2 NEFMP1-201ENST00000443423 1006 ntBASIC1.1□□□□□ -2.23
CCDC168Q8NDH2 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
CCDC168Q8NDH2 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC168Q8NDH2 AC110792.2-201ENST00000510278 224 ntBASIC1.1□□□□□ -2.23
CCDC168Q8NDH2 RNU1-92P-201ENST00000517017 135 ntBASIC1.1□□□□□ -2.23
CCDC168Q8NDH2 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.1□□□□□ -2.23
CCDC168Q8NDH2 NOP56P3-201ENST00000549457 385 ntBASIC1.1□□□□□ -2.23
CCDC168Q8NDH2 MIR4446-201ENST00000578505 67 ntBASIC1.1□□□□□ -2.23
CCDC168Q8NDH2 AC006270.2-201ENST00000578523 652 ntBASIC1.1□□□□□ -2.23
CCDC168Q8NDH2 SNHG22-203ENST00000617833 660 ntBASIC1.1□□□□□ -2.23
CCDC168Q8NDH2 AC008669.1-201ENST00000565823 2178 ntBASIC1.09□□□□□ -2.23
CCDC168Q8NDH2 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
CCDC168Q8NDH2 SNORA9.1-201ENST00000362412 131 ntBASIC1.09□□□□□ -2.23
CCDC168Q8NDH2 AC000111.3-201ENST00000433478 193 ntBASIC1.09□□□□□ -2.23
CCDC168Q8NDH2 AC108059.3-201ENST00000456388 214 ntBASIC1.09□□□□□ -2.23
CCDC168Q8NDH2 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.09□□□□□ -2.23
CCDC168Q8NDH2 AC093752.1-206ENST00000511823 336 ntBASIC1.09□□□□□ -2.23
CCDC168Q8NDH2 AC239860.2-201ENST00000525886 270 ntBASIC1.09□□□□□ -2.23
CCDC168Q8NDH2 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.09□□□□□ -2.23
CCDC168Q8NDH2 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
CCDC168Q8NDH2 AC146944.4-201ENST00000602697 718 ntBASIC1.09□□□□□ -2.23
CCDC168Q8NDH2 AL159169.2-201ENST00000610061 1269 ntBASIC1.09□□□□□ -2.23
CCDC168Q8NDH2 AC007742.2-201ENST00000618226 398 ntBASIC1.09□□□□□ -2.23
CCDC168Q8NDH2 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.09□□□□□ -2.23
CCDC168Q8NDH2 AC100821.1-201ENST00000523153 2479 ntBASIC1.09□□□□□ -2.24
CCDC168Q8NDH2 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC1.09□□□□□ -2.24
CCDC168Q8NDH2 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC1.09□□□□□ -2.24
CCDC168Q8NDH2 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.09□□□□□ -2.24
CCDC168Q8NDH2 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.09□□□□□ -2.24
CCDC168Q8NDH2 MIR3660-201ENST00000584845 100 ntBASIC1.09□□□□□ -2.24
CCDC168Q8NDH2 AC116447.1-201ENST00000613153 453 ntBASIC1.09□□□□□ -2.24
CCDC168Q8NDH2 AL590099.1-201ENST00000615276 138 ntBASIC1.09□□□□□ -2.24
CCDC168Q8NDH2 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.09□□□□□ -2.24
CCDC168Q8NDH2 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 SNORA18.2-201ENST00000383865 132 ntBASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 MIR1265-201ENST00000408444 86 ntBASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 RNA5SP489-201ENST00000410986 109 ntBASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 AC090774.1-201ENST00000435925 246 ntBASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 HSPE1P4-201ENST00000550617 308 ntBASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 CD24P2-201ENST00000565486 219 ntBASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 ACTR3BP3-201ENST00000565577 979 ntBASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 MIR8087-201ENST00000612745 78 ntBASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 AP000676.4-201ENST00000624659 623 ntBASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 MTND5P9-201ENST00000503854 1755 ntBASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 AP000560.1-201ENST00000624150 1937 ntBASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 SSXP9-201ENST00000417503 292 ntBASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 BMI1P1-201ENST00000445879 941 ntBASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 SNORD116-26-201ENST00000516006 96 ntBASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 Y_RNA.700-201ENST00000516806 100 ntBASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 AC087373.1-201ENST00000524920 491 ntBASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 AL356118.1-201ENST00000635272 1078 ntBASIC1.08□□□□□ -2.24
CCDC168Q8NDH2 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CCDC168Q8NDH2 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.07□□□□□ -2.24
CCDC168Q8NDH2 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
CCDC168Q8NDH2 SNORD114-23-201ENST00000363536 72 ntBASIC1.07□□□□□ -2.24
CCDC168Q8NDH2 SNORD56.5-201ENST00000364281 72 ntBASIC1.07□□□□□ -2.24
CCDC168Q8NDH2 RNU6-670P-201ENST00000364312 104 ntBASIC1.07□□□□□ -2.24
CCDC168Q8NDH2 AC016691.1-201ENST00000441321 413 ntBASIC1.07□□□□□ -2.24
CCDC168Q8NDH2 AP005435.4-201ENST00000529514 284 ntBASIC1.07□□□□□ -2.24
CCDC168Q8NDH2 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms