Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 AC018552.3-201ENST00000567416 561 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 AC087499.8-201ENST00000578406 226 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 AC060771.1-201ENST00000582031 164 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 AC007687.1-201ENST00000602704 304 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 AC113139.1-201ENST00000605049 239 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 AC103710.2-201ENST00000609912 942 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 AC116447.1-201ENST00000613153 453 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 MIR6864-201ENST00000617935 70 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 AL159972.1-201ENST00000625150 448 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 AL445437.1-201ENST00000623157 3087 ntBASIC4.1□□□□□ -1.75
SLC44A3Q8N4M1 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 NOL8P1-201ENST00000508336 3529 ntBASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 NACAP2-201ENST00000318548 624 ntBASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 Y_RNA.132-201ENST00000363421 102 ntBASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 RNU4-48P-201ENST00000365559 182 ntBASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 MIR93-201ENST00000385024 80 ntBASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 RNU6-510P-201ENST00000391239 108 ntBASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 RNU6-193P-201ENST00000410977 107 ntBASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 RN7SKP140-201ENST00000411196 284 ntBASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 RNU6-603P-201ENST00000411403 107 ntBASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 AL035423.1-201ENST00000420331 213 ntBASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 MTND2P23-201ENST00000422990 651 ntBASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 AL353748.1-201ENST00000440753 474 ntBASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 snoU13.8-201ENST00000458890 104 ntBASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 RNU6-329P-201ENST00000459618 107 ntBASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 AC020893.1-201ENST00000502452 580 ntBASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 AC016065.2-201ENST00000514530 444 ntBASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 RN7SKP13-201ENST00000515933 244 ntBASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 SUMO2P20-201ENST00000520803 283 ntBASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 AC020661.2-201ENST00000560114 134 ntBASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 AC090615.1-201ENST00000577519 154 ntBASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 AC068790.3-201ENST00000602988 553 ntBASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 AL360085.1-201ENST00000604713 532 ntBASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 MIR432-201ENST00000606207 94 ntBASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 U6.105-201ENST00000637379 88 ntBASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SLC44A3Q8N4M1 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SLC44A3Q8N4M1 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SLC44A3Q8N4M1 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SLC44A3Q8N4M1 AC018529.3-201ENST00000624212 2254 ntBASIC4.09□□□□□ -1.76
SLC44A3Q8N4M1 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SLC44A3Q8N4M1 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
SLC44A3Q8N4M1 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 RNU6-97P-201ENST00000363387 104 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 RNU5A-8P-201ENST00000364102 114 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 Y_RNA.231-201ENST00000364358 102 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 MIR19A-201ENST00000384878 82 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 SSXP10-201ENST00000402595 565 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 TXNP7-201ENST00000406296 293 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 RPS7P15-201ENST00000415804 584 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 NCOR1P3-201ENST00000420479 303 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 MTCYBP8-201ENST00000422855 651 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 AC137499.1-201ENST00000427602 88 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 RPS20P5-201ENST00000434808 360 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 HSPD1P21-201ENST00000436541 245 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 HMGB1P18-201ENST00000438801 619 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 AC093156.1-201ENST00000440382 670 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 RPL7P52-201ENST00000449200 742 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 ASNSP3-201ENST00000451989 1306 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 Y_RNA.632-201ENST00000459189 102 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 MRPS17P3-201ENST00000465453 385 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 RN7SL293P-201ENST00000481765 281 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 UBE2CP3-201ENST00000502715 450 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 AC025445.1-201ENST00000502728 300 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 HMGN1P11-201ENST00000508668 303 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 RNU4-49P-201ENST00000516080 140 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms