Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 UBE2V2P2-201ENST00000587677 504 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 LARP7P1-201ENST00000605576 316 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 AC009994.1-201ENST00000606889 253 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 MIR15A-201ENST00000607334 83 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 AC069234.5-201ENST00000611056 416 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 SNX18P1Y-201ENST00000616231 511 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 MIR6891-201ENST00000618788 93 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 AC140113.4-201ENST00000622087 222 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 AP003122.6-201ENST00000623831 495 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 AL512643.1-201ENST00000635735 524 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 AP004289.2-201ENST00000444413 1457 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 AL139276.1-201ENST00000311910 1001 ntBASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 Y_RNA.72-201ENST00000362894 103 ntBASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 RNU6-767P-201ENST00000384132 107 ntBASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 PIGFP3-201ENST00000441918 722 ntBASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 RN7SL691P-201ENST00000494487 301 ntBASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 AP001086.1-201ENST00000494882 321 ntBASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 HMGN1P12-201ENST00000499125 195 ntBASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 AC091951.2-201ENST00000500762 203 ntBASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 AL592156.1-201ENST00000508758 304 ntBASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 AC114781.4-201ENST00000513707 639 ntBASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 RNA5SP291-201ENST00000517222 105 ntBASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 HMGB1P19-201ENST00000517578 577 ntBASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 AC015912.2-201ENST00000571053 181 ntBASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 MIR4429-201ENST00000580105 73 ntBASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SYNPOQ8N3V7 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.46□□□□□ -1.69
SYNPOQ8N3V7 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.46□□□□□ -1.69
SYNPOQ8N3V7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
SYNPOQ8N3V7 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SYNPOQ8N3V7 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 RNU6-1167P-201ENST00000363227 94 ntBASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 MIR195-201ENST00000385194 87 ntBASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 RNU6-1009P-201ENST00000390996 107 ntBASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 MIR921-201ENST00000401133 56 ntBASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 AL356095.1-201ENST00000417217 199 ntBASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 AC012498.1-201ENST00000424037 437 ntBASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 RPL35AP12-201ENST00000425362 338 ntBASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 AC007547.1-201ENST00000462177 490 ntBASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 RPL23AP11-201ENST00000475260 469 ntBASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 TTC39CP1-201ENST00000512513 755 ntBASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 AC022690.1-201ENST00000526681 550 ntBASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 AP000763.2-201ENST00000540641 163 ntBASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 AC004024.1-201ENST00000549244 247 ntBASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 RPL21P7-201ENST00000557463 483 ntBASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 AC098826.3-201ENST00000603823 466 ntBASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 FAM27D1-201ENST00000612308 341 ntBASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 AC048347.1-201ENST00000624621 427 ntBASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 Z99571.1-201ENST00000636677 394 ntBASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.46□□□□□ -1.7
SYNPOQ8N3V7 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms