Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 RN7SKP260-201ENST00000516907 149 ntBASIC5.41□□□□□ -1.54
SIX5Q8N196 OR5D17P-201ENST00000531492 978 ntBASIC5.41□□□□□ -1.54
SIX5Q8N196 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.41□□□□□ -1.54
SIX5Q8N196 AP006289.1-201ENST00000538089 277 ntBASIC5.41□□□□□ -1.54
SIX5Q8N196 HSPE1P20-201ENST00000538133 289 ntBASIC5.41□□□□□ -1.54
SIX5Q8N196 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.41□□□□□ -1.54
SIX5Q8N196 AC023157.2-201ENST00000540596 141 ntBASIC5.41□□□□□ -1.54
SIX5Q8N196 TRAV32-201ENST00000553993 340 ntBASIC5.41□□□□□ -1.54
SIX5Q8N196 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC5.41□□□□□ -1.54
SIX5Q8N196 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.41□□□□□ -1.54
SIX5Q8N196 AC004584.2-201ENST00000570407 410 ntBASIC5.41□□□□□ -1.54
SIX5Q8N196 AC022884.2-201ENST00000578535 580 ntBASIC5.41□□□□□ -1.54
SIX5Q8N196 MIR1273C-201ENST00000578669 77 ntBASIC5.41□□□□□ -1.54
SIX5Q8N196 MIR4737-201ENST00000583979 81 ntBASIC5.41□□□□□ -1.54
SIX5Q8N196 AL133481.2-203ENST00000607558 139 ntBASIC5.41□□□□□ -1.54
SIX5Q8N196 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.41□□□□□ -1.54
SIX5Q8N196 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.41□□□□□ -1.54
SIX5Q8N196 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SIX5Q8N196 AC233263.6-201ENST00000631132 1963 ntBASIC5.41□□□□□ -1.54
SIX5Q8N196 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
SIX5Q8N196 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.41□□□□□ -1.54
SIX5Q8N196 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.41□□□□□ -1.54
SIX5Q8N196 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SIX5Q8N196 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SIX5Q8N196 AP001029.2-203ENST00000589795 4910 ntBASIC5.41□□□□□ -1.54
SIX5Q8N196 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
SIX5Q8N196 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SIX5Q8N196 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
SIX5Q8N196 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
SIX5Q8N196 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SIX5Q8N196 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.4□□□□□ -1.54
SIX5Q8N196 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SIX5Q8N196 RNY3P11-201ENST00000364153 102 ntBASIC5.4□□□□□ -1.54
SIX5Q8N196 RNU6-472P-201ENST00000384299 107 ntBASIC5.4□□□□□ -1.54
SIX5Q8N196 DDX39BP1-205ENST00000422507 192 ntBASIC5.4□□□□□ -1.54
SIX5Q8N196 AC068287.1-201ENST00000430283 295 ntBASIC5.4□□□□□ -1.54
SIX5Q8N196 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.4□□□□□ -1.54
SIX5Q8N196 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.4□□□□□ -1.54
SIX5Q8N196 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.4□□□□□ -1.54
SIX5Q8N196 RNU6-1037P-201ENST00000459571 107 ntBASIC5.4□□□□□ -1.54
SIX5Q8N196 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC5.4□□□□□ -1.54
SIX5Q8N196 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC5.4□□□□□ -1.54
SIX5Q8N196 TOMM20P2-201ENST00000540082 421 ntBASIC5.4□□□□□ -1.54
SIX5Q8N196 AC137627.1-201ENST00000545761 289 ntBASIC5.4□□□□□ -1.54
SIX5Q8N196 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC5.4□□□□□ -1.54
SIX5Q8N196 AL121917.1-203ENST00000605534 577 ntBASIC5.4□□□□□ -1.54
SIX5Q8N196 HMGB1P50-201ENST00000605814 607 ntBASIC5.4□□□□□ -1.54
SIX5Q8N196 RMST_4.1-201ENST00000616886 107 ntBASIC5.4□□□□□ -1.54
SIX5Q8N196 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.4□□□□□ -1.54
SIX5Q8N196 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
SIX5Q8N196 AC004076.2-201ENST00000620532 3323 ntBASIC5.4□□□□□ -1.55
SIX5Q8N196 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SIX5Q8N196 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SIX5Q8N196 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
SIX5Q8N196 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.4□□□□□ -1.55
SIX5Q8N196 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SIX5Q8N196 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
SIX5Q8N196 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SIX5Q8N196 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SIX5Q8N196 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SIX5Q8N196 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SIX5Q8N196 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SIX5Q8N196 AL365440.1-201ENST00000436135 2167 ntBASIC5.39□□□□□ -1.55
SIX5Q8N196 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SIX5Q8N196 MFSD8-216ENST00000641147 4009 ntBASIC5.39□□□□□ -1.55
SIX5Q8N196 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SIX5Q8N196 Y_RNA.33-201ENST00000362591 102 ntBASIC5.39□□□□□ -1.55
SIX5Q8N196 RNU6-1026P-201ENST00000384465 108 ntBASIC5.39□□□□□ -1.55
SIX5Q8N196 RPL11P3-201ENST00000395256 523 ntBASIC5.39□□□□□ -1.55
SIX5Q8N196 LAP3P1-201ENST00000403648 294 ntBASIC5.39□□□□□ -1.55
SIX5Q8N196 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.39□□□□□ -1.55
SIX5Q8N196 RBMY1KP-201ENST00000423480 476 ntBASIC5.39□□□□□ -1.55
SIX5Q8N196 OR2AH1P-201ENST00000425717 928 ntBASIC5.39□□□□□ -1.55
SIX5Q8N196 ARL5AP4-201ENST00000430731 512 ntBASIC5.39□□□□□ -1.55
SIX5Q8N196 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.39□□□□□ -1.55
SIX5Q8N196 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.39□□□□□ -1.55
SIX5Q8N196 TDGF1P1-201ENST00000445734 527 ntBASIC5.39□□□□□ -1.55
SIX5Q8N196 AC140172.1-201ENST00000502928 141 ntBASIC5.39□□□□□ -1.55
SIX5Q8N196 MLLT10P2-201ENST00000506434 249 ntBASIC5.39□□□□□ -1.55
SIX5Q8N196 SNORA25.11-201ENST00000515935 105 ntBASIC5.39□□□□□ -1.55
SIX5Q8N196 RNA5SP471-201ENST00000516971 106 ntBASIC5.39□□□□□ -1.55
SIX5Q8N196 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.39□□□□□ -1.55
SIX5Q8N196 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.39□□□□□ -1.55
SIX5Q8N196 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.39□□□□□ -1.55
SIX5Q8N196 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.39□□□□□ -1.55
SIX5Q8N196 AC022968.1-201ENST00000567372 442 ntBASIC5.39□□□□□ -1.55
SIX5Q8N196 RPS29P30-201ENST00000600975 111 ntBASIC5.39□□□□□ -1.55
SIX5Q8N196 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SIX5Q8N196 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.39□□□□□ -1.55
SIX5Q8N196 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.39□□□□□ -1.55
SIX5Q8N196 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SIX5Q8N196 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SIX5Q8N196 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.39□□□□□ -1.55
SIX5Q8N196 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SIX5Q8N196 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SIX5Q8N196 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SIX5Q8N196 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SIX5Q8N196 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.39□□□□□ -1.55
SIX5Q8N196 SMG1P4-204ENST00000523028 4131 ntBASIC5.39□□□□□ -1.55
SIX5Q8N196 AC010615.1-201ENST00000594254 1764 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms