Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MTND1P7-201ENST00000632801 297 ntBASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 AC073869.8-201ENST00000641806 335 ntBASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CCDC116Q8IYX3 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
CCDC116Q8IYX3 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 AL360270.2-201ENST00000562952 5985 ntBASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 ZNF826P-207ENST00000622273 1910 ntBASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 RNA5SP326-201ENST00000363209 110 ntBASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 RNA5SP435-201ENST00000364044 108 ntBASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 RN7SKP15-201ENST00000364742 309 ntBASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 SNORD116-18-201ENST00000383961 92 ntBASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 Y_RNA.441-201ENST00000384123 112 ntBASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 AC005042.1-201ENST00000393397 800 ntBASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 DPPA2P3-201ENST00000411853 655 ntBASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 CFL1P1-202ENST00000432948 411 ntBASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 RNY3P16-201ENST00000516338 101 ntBASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 FAM60BP-201ENST00000578364 658 ntBASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 RN7SL544P-201ENST00000617232 284 ntBASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 RN7SL763P-201ENST00000620922 284 ntBASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 AC008785.1-201ENST00000624475 456 ntBASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 AC079776.5-201ENST00000641920 211 ntBASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 AC114774.1-201ENST00000507410 1770 ntBASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 AL731532.2-201ENST00000623542 1953 ntBASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC116Q8IYX3 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 SMG1P6-201ENST00000532337 2930 ntBASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 MIR412-201ENST00000362142 91 ntBASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 RNU6-222P-201ENST00000362438 107 ntBASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 SNORA64.1-201ENST00000362600 132 ntBASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 RNU6-227P-201ENST00000362865 103 ntBASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 RNU6-514P-201ENST00000384208 107 ntBASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 RNU6-882P-201ENST00000391025 103 ntBASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 RNU6-1025P-201ENST00000410629 104 ntBASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 MTCO1P39-201ENST00000426148 480 ntBASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 RPS27AP12-201ENST00000429552 465 ntBASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 AL358472.1-201ENST00000431295 329 ntBASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 TMEM183AP1-205ENST00000432739 290 ntBASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 CEACAMP7-201ENST00000444105 496 ntBASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 RN7SL799P-201ENST00000475891 298 ntBASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 IGLV3-24-201ENST00000517477 197 ntBASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 AC093591.2-201ENST00000565254 3843 ntBASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 AC023575.1-201ENST00000580510 358 ntBASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 AC107294.1-201ENST00000609524 467 ntBASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 AL365222.1-201ENST00000614661 98 ntBASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.32□□□□□ -1.56
CCDC116Q8IYX3 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC116Q8IYX3 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms