Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 snoU13.28-201ENST00000459235 104 ntBASIC2.71□□□□□ -1.98
CCDC50Q8IVM0 MEMO1P3-201ENST00000459811 302 ntBASIC2.71□□□□□ -1.98
CCDC50Q8IVM0 AC108729.1-201ENST00000487812 947 ntBASIC2.71□□□□□ -1.98
CCDC50Q8IVM0 AC116353.3-201ENST00000511215 249 ntBASIC2.71□□□□□ -1.98
CCDC50Q8IVM0 AC026801.2-201ENST00000515352 425 ntBASIC2.71□□□□□ -1.98
CCDC50Q8IVM0 RNU6-1256P-201ENST00000516539 103 ntBASIC2.71□□□□□ -1.98
CCDC50Q8IVM0 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC50Q8IVM0 AP003497.1-201ENST00000528472 562 ntBASIC2.71□□□□□ -1.98
CCDC50Q8IVM0 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC50Q8IVM0 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC50Q8IVM0 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC50Q8IVM0 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC50Q8IVM0 AC005951.2-201ENST00000576282 495 ntBASIC2.71□□□□□ -1.98
CCDC50Q8IVM0 MIR3200-201ENST00000580767 85 ntBASIC2.71□□□□□ -1.98
CCDC50Q8IVM0 VN1R90P-201ENST00000595717 726 ntBASIC2.71□□□□□ -1.98
CCDC50Q8IVM0 AC068313.1-201ENST00000604028 1008 ntBASIC2.71□□□□□ -1.98
CCDC50Q8IVM0 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CCDC50Q8IVM0 AC079597.1-201ENST00000624306 508 ntBASIC2.71□□□□□ -1.98
CCDC50Q8IVM0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 RNU6-621P-201ENST00000364752 109 ntBASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 RNU1-100P-201ENST00000365255 165 ntBASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 AL953862.1-201ENST00000423016 168 ntBASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 ZYG11AP1-201ENST00000430329 837 ntBASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 RPS25P9-201ENST00000435591 252 ntBASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 RPS15AP7-201ENST00000439294 405 ntBASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 AC025750.2-201ENST00000442609 450 ntBASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 SETP11-201ENST00000473027 690 ntBASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 AC134050.1-201ENST00000495088 933 ntBASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 PRELID2P1-201ENST00000552837 301 ntBASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 MIR3908-201ENST00000579798 126 ntBASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 AC007619.2-201ENST00000605743 379 ntBASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 RNU4-5P-201ENST00000607255 135 ntBASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 AC006386.1-201ENST00000619436 415 ntBASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 AC099654.9-201ENST00000637055 678 ntBASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 OR5H6-203ENST00000642105 978 ntBASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 AP000526.1-201ENST00000603308 1388 ntBASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 AL390862.1-201ENST00000635467 1469 ntBASIC2.7□□□□□ -1.98
CCDC50Q8IVM0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 SNORD62.1-201ENST00000362541 86 ntBASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 RNU1-39P-201ENST00000383897 165 ntBASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 Y_RNA.465-201ENST00000384293 102 ntBASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 RPLP0P7-201ENST00000416050 667 ntBASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 USP9YP27-201ENST00000418455 438 ntBASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 TAAR7P-201ENST00000436141 242 ntBASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 AC105272.1-201ENST00000438604 198 ntBASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 AC126182.1-201ENST00000478134 357 ntBASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 LARP1BP2-201ENST00000486594 519 ntBASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 FAM172BP-201ENST00000487497 1089 ntBASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 RPL30P5-201ENST00000494923 336 ntBASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 AC107222.1-201ENST00000510899 637 ntBASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 RN7SKP132-201ENST00000516001 208 ntBASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 AL132857.1-201ENST00000555180 708 ntBASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 ACTR3BP3-201ENST00000565577 979 ntBASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 AC007336.1-201ENST00000576365 3828 ntBASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 MIR5092-201ENST00000583139 88 ntBASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 AL161734.1-201ENST00000609720 557 ntBASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 MIR6130-201ENST00000619419 109 ntBASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC50Q8IVM0 AC005832.2-201ENST00000538921 1430 ntBASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 ZNF29P-201ENST00000225587 168 ntBASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 RNU6-97P-201ENST00000363387 104 ntBASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 RNU4-68P-201ENST00000364314 141 ntBASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 RNA5SP139-201ENST00000364340 117 ntBASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 RNU6-114P-201ENST00000384704 105 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms