Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AL359212.1-201ENST00000556608 614 ntBASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 AC060771.1-201ENST00000582031 164 ntBASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 AC005730.3-201ENST00000583067 366 ntBASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 AC007621.1-201ENST00000604544 437 ntBASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 AL161756.2-201ENST00000604597 246 ntBASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 AC093788.1-201ENST00000609356 927 ntBASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 AL136964.1-201ENST00000622038 2990 ntBASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 AC009161.2-201ENST00000624626 138 ntBASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 ZNF734P-201ENST00000419494 1534 ntBASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.4□□□□□ -1.7
UBE3BQ7Z3V4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.4□□□□□ -1.7
UBE3BQ7Z3V4 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 Y_RNA.548-201ENST00000384656 105 ntBASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 SNRPEP10-201ENST00000420249 274 ntBASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 AC006548.1-201ENST00000427470 102 ntBASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 AC008065.1-201ENST00000428525 348 ntBASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 AC119618.1-201ENST00000434191 222 ntBASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 UBE2V1P13-201ENST00000436983 439 ntBASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 RNU6-420P-201ENST00000458780 107 ntBASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 AC084357.1-201ENST00000473404 255 ntBASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 MTCO3P44-201ENST00000510977 541 ntBASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 AC090572.1-201ENST00000519251 160 ntBASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 AC068790.3-201ENST00000602988 553 ntBASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 AL162413.1-201ENST00000603198 110 ntBASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 YWHAQP7-201ENST00000603536 658 ntBASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 BNIP3P9-201ENST00000603714 553 ntBASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 AP003117.2-201ENST00000606010 545 ntBASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 CR381572.1-201ENST00000625098 102 ntBASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 FER-210ENST00000628534 558 ntTSL 5 BASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 AC099654.5-201ENST00000636479 350 ntBASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
UBE3BQ7Z3V4 NCAPGP1-201ENST00000505112 1814 ntBASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 RNU6-1120P-201ENST00000362988 108 ntBASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 RNY4P16-201ENST00000364768 94 ntBASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 RNU6-876P-201ENST00000391295 104 ntBASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 U3.39-201ENST00000408569 239 ntBASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 MTND4LP16-201ENST00000440828 295 ntBASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 FDX1P2-201ENST00000450769 375 ntBASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 RPL21P10-201ENST00000463521 490 ntBASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 AC083798.1-201ENST00000472671 131 ntBASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 S100A11P1-201ENST00000477525 312 ntBASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 COX7A2P2-201ENST00000505291 250 ntBASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 RNA5SP337-201ENST00000517007 109 ntBASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 AF235103.2-201ENST00000525753 346 ntBASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 PTP4A1P6-201ENST00000531034 478 ntBASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 AC008945.2-201ENST00000606056 604 ntBASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 AC063943.3-201ENST00000615562 356 ntBASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 uc_338.12-201ENST00000616344 181 ntBASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.39□□□□□ -1.71
UBE3BQ7Z3V4 AL645937.1-201ENST00000641739 1652 ntBASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 CBX3P1-201ENST00000325243 554 ntBASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 RNU6-1097P-201ENST00000363586 107 ntBASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 RNU6-694P-201ENST00000364071 147 ntBASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 RNA5SP267-201ENST00000364893 126 ntBASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 RNU6-339P-201ENST00000384310 107 ntBASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 SNORD51-201ENST00000384320 80 ntBASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 RPL7P54-201ENST00000438336 674 ntBASIC4.38□□□□□ -1.71
UBE3BQ7Z3V4 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms