Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AF038458.1-201ENST00000588406 262 ntBASIC3.36□□□□□ -1.87
SHFQ7M4L6 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.36□□□□□ -1.87
SHFQ7M4L6 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.36□□□□□ -1.87
SHFQ7M4L6 AC007363.1-201ENST00000604736 620 ntBASIC3.36□□□□□ -1.87
SHFQ7M4L6 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
SHFQ7M4L6 MIR6716-201ENST00000613413 80 ntBASIC3.36□□□□□ -1.87
SHFQ7M4L6 AL356321.1-201ENST00000621360 228 ntBASIC3.36□□□□□ -1.87
SHFQ7M4L6 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SHFQ7M4L6 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHFQ7M4L6 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHFQ7M4L6 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.36□□□□□ -1.87
SHFQ7M4L6 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.36□□□□□ -1.87
SHFQ7M4L6 RLIMP1-201ENST00000339626 1680 ntBASIC3.36□□□□□ -1.87
SHFQ7M4L6 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHFQ7M4L6 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHFQ7M4L6 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHFQ7M4L6 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHFQ7M4L6 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SHFQ7M4L6 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHFQ7M4L6 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SHFQ7M4L6 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SHFQ7M4L6 RNU6-1120P-201ENST00000362988 108 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 RNY4P14-201ENST00000363656 96 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 Y_RNA.367-201ENST00000365544 101 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.35□□□□□ -1.87
SHFQ7M4L6 RNU6-1181P-201ENST00000384191 106 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 RPL21P65-201ENST00000406094 466 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 RNU2-9P-201ENST00000410194 145 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 RPS15AP6-201ENST00000420703 385 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.35□□□□□ -1.87
SHFQ7M4L6 RPL31P12-201ENST00000422587 358 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.35□□□□□ -1.87
SHFQ7M4L6 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.35□□□□□ -1.87
SHFQ7M4L6 ELOCP14-201ENST00000428070 331 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 MED13P1-201ENST00000428342 171 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 RPS20P5-201ENST00000434808 360 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 CYCSP43-201ENST00000438233 310 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 ELOCP7-201ENST00000439968 331 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.35□□□□□ -1.87
SHFQ7M4L6 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.35□□□□□ -1.87
SHFQ7M4L6 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.35□□□□□ -1.87
SHFQ7M4L6 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.35□□□□□ -1.87
SHFQ7M4L6 RPS7P7-201ENST00000463499 571 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 AC010618.1-201ENST00000469924 477 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 AC006463.2-201ENST00000473326 348 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 RPS27AP1-201ENST00000475545 471 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.35□□□□□ -1.87
SHFQ7M4L6 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.35□□□□□ -1.87
SHFQ7M4L6 RNA5SP309-201ENST00000516670 106 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.35□□□□□ -1.87
SHFQ7M4L6 ERHP1-201ENST00000523006 310 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 AC104383.1-201ENST00000530297 370 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 SNRPGP16-201ENST00000533275 226 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.35□□□□□ -1.87
SHFQ7M4L6 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.35□□□□□ -1.87
SHFQ7M4L6 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.35□□□□□ -1.87
SHFQ7M4L6 AL512360.1-201ENST00000555346 234 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 OR4H12P-201ENST00000556269 907 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 AL133241.1-201ENST00000556832 487 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.35□□□□□ -1.87
SHFQ7M4L6 AC005951.2-201ENST00000576282 495 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.35□□□□□ -1.87
SHFQ7M4L6 AC006116.10-201ENST00000591836 581 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.35□□□□□ -1.87
SHFQ7M4L6 MIR6867-201ENST00000610636 67 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.35□□□□□ -1.87
SHFQ7M4L6 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SHFQ7M4L6 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.35□□□□□ -1.87
SHFQ7M4L6 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
SHFQ7M4L6 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHFQ7M4L6 ZNF680P1-201ENST00000436625 1469 ntBASIC3.35□□□□□ -1.87
SHFQ7M4L6 OTUD4P1-201ENST00000237841 3067 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SHFQ7M4L6 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SHFQ7M4L6 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
SHFQ7M4L6 RNU6-188P-201ENST00000364207 107 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 SNORA62-201ENST00000365493 153 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SHFQ7M4L6 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.34□□□□□ -1.87
SHFQ7M4L6 Y_RNA.402-201ENST00000383972 102 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 SNORA36C-201ENST00000384289 132 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 SNORA70C-201ENST00000384538 135 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 EI24P2-201ENST00000397776 1076 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 TXNP7-201ENST00000406296 293 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 SNORA57.3-201ENST00000411095 141 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 SDCBPP3-201ENST00000419629 891 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 AC093106.2-201ENST00000428212 385 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 MTND1P2-201ENST00000430604 821 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 AC000111.3-201ENST00000433478 193 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 RPL21P112-201ENST00000434403 463 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.34□□□□□ -1.87
SHFQ7M4L6 FDX1P2-201ENST00000450769 375 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 AC027673.1-201ENST00000456245 405 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 RNU6-420P-201ENST00000458780 107 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 SNORD97-201ENST00000459187 142 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 AC092989.1-201ENST00000481235 277 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 AC108860.1-201ENST00000484521 383 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 RPL23AP55-201ENST00000498163 452 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms