Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 MTND5P3-201ENST00000438536 1800 ntBASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 RNU6-1297P-201ENST00000384415 104 ntBASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 RPS26P8-201ENST00000393490 348 ntBASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 Z74021.1-201ENST00000423610 407 ntBASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 CYCSP43-201ENST00000438233 310 ntBASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 GTF2IP13-201ENST00000438487 386 ntBASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 RPL23AP52-201ENST00000439311 478 ntBASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 AC083904.1-201ENST00000487828 231 ntBASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 AP003730.1-201ENST00000524605 285 ntBASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 MTND6P33-201ENST00000571794 183 ntBASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 POLR3GP2-201ENST00000588366 668 ntBASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 HMGB2P1-201ENST00000591146 634 ntBASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 AC113403.1-201ENST00000604910 193 ntBASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 AL365204.3-201ENST00000612448 685 ntBASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 AC012409.4-201ENST00000612923 249 ntBASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 AC103705.1-201ENST00000619013 241 ntBASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 MIR7154-201ENST00000620673 73 ntBASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 AL589994.2-201ENST00000621124 579 ntBASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RUFY4Q6ZNE9 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.9□□□□□ -1.62
RUFY4Q6ZNE9 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
RUFY4Q6ZNE9 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.9□□□□□ -1.62
RUFY4Q6ZNE9 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RUFY4Q6ZNE9 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RUFY4Q6ZNE9 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RUFY4Q6ZNE9 Y_RNA.339-201ENST00000365325 102 ntBASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 Y_RNA.394-201ENST00000383942 103 ntBASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 LAP3P1-201ENST00000403648 294 ntBASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 AL121834.1-202ENST00000404494 277 ntBASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 NDUFS5P1-201ENST00000405668 289 ntBASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 VN1R36P-201ENST00000414936 291 ntBASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 AL353729.1-201ENST00000425044 720 ntBASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 OR4C10P-201ENST00000434991 931 ntBASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 RNU6-352P-201ENST00000516908 107 ntBASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 AC090136.1-201ENST00000520009 240 ntBASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 RPL7P50-201ENST00000600588 727 ntBASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 CTHRC1P1-201ENST00000605383 469 ntBASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 Z82243.1-201ENST00000609432 473 ntBASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 AC134503.1-201ENST00000633048 54 ntBASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RUFY4Q6ZNE9 AC139769.1-204ENST00000472297 1931 ntBASIC4.89□□□□□ -1.63
RUFY4Q6ZNE9 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RUFY4Q6ZNE9 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RUFY4Q6ZNE9 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.89□□□□□ -1.63
RUFY4Q6ZNE9 Y_RNA.399-201ENST00000383955 105 ntBASIC4.89□□□□□ -1.63
RUFY4Q6ZNE9 RNU6-1127P-201ENST00000384580 107 ntBASIC4.89□□□□□ -1.63
RUFY4Q6ZNE9 AL445189.1-201ENST00000405722 338 ntBASIC4.89□□□□□ -1.63
RUFY4Q6ZNE9 AL583834.1-201ENST00000406943 343 ntBASIC4.89□□□□□ -1.63
RUFY4Q6ZNE9 MIR548K-201ENST00000408406 116 ntBASIC4.89□□□□□ -1.63
RUFY4Q6ZNE9 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.89□□□□□ -1.63
RUFY4Q6ZNE9 AC093106.2-201ENST00000428212 385 ntBASIC4.89□□□□□ -1.63
RUFY4Q6ZNE9 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.89□□□□□ -1.63
RUFY4Q6ZNE9 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.89□□□□□ -1.63
RUFY4Q6ZNE9 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.89□□□□□ -1.63
RUFY4Q6ZNE9 SCARNA18-201ENST00000459004 134 ntBASIC4.89□□□□□ -1.63
RUFY4Q6ZNE9 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.89□□□□□ -1.63
RUFY4Q6ZNE9 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 205.1 ms