Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 ATG3P1-201ENST00000419507 911 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.71□□□□□ -1.98
ZNF544Q6NX49 AC007742.1-201ENST00000425789 329 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.71□□□□□ -1.98
ZNF544Q6NX49 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.71□□□□□ -1.98
ZNF544Q6NX49 ELOCP26-201ENST00000436067 329 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 RPL23AP58-201ENST00000440453 469 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 RPS27AP8-201ENST00000452665 445 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 HMGB1P15-201ENST00000453854 435 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 snoU109.4-201ENST00000458953 143 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 RPL21P41-201ENST00000459863 264 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 HMGB1P25-201ENST00000468402 607 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 AC072039.1-201ENST00000477611 581 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 RPS3AP14-201ENST00000483907 780 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
ZNF544Q6NX49 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.71□□□□□ -1.98
ZNF544Q6NX49 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
ZNF544Q6NX49 AC117522.2-201ENST00000510049 657 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.71□□□□□ -1.98
ZNF544Q6NX49 AC093677.1-201ENST00000514414 678 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.71□□□□□ -1.98
ZNF544Q6NX49 MTND5P4-201ENST00000514978 288 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.71□□□□□ -1.98
ZNF544Q6NX49 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
ZNF544Q6NX49 AC106038.2-201ENST00000520706 568 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.71□□□□□ -1.98
ZNF544Q6NX49 AP003385.6-201ENST00000531603 374 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 AC068587.4-201ENST00000533893 186 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.71□□□□□ -1.98
ZNF544Q6NX49 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
ZNF544Q6NX49 MIR3670-2-201ENST00000582974 65 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 MIR3670-1-201ENST00000584160 65 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 MIR3670-3-201ENST00000584855 65 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.71□□□□□ -1.98
ZNF544Q6NX49 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.71□□□□□ -1.98
ZNF544Q6NX49 DUXAP4-201ENST00000603046 613 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 AC090186.1-201ENST00000605991 572 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 AC080013.6-201ENST00000606185 215 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 AC106028.5-201ENST00000610332 395 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 MIR3670-4-201ENST00000612260 65 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 AC002076.2-201ENST00000617362 122 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 AL596245.1-201ENST00000618994 362 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.71□□□□□ -1.98
ZNF544Q6NX49 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.71□□□□□ -1.98
ZNF544Q6NX49 AC091965.5-201ENST00000624785 342 ntBASIC2.71□□□□□ -1.98
ZNF544Q6NX49 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
ZNF544Q6NX49 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.71□□□□□ -1.98
ZNF544Q6NX49 AC233263.6-201ENST00000631132 1963 ntBASIC2.7□□□□□ -1.98
ZNF544Q6NX49 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.7□□□□□ -1.98
ZNF544Q6NX49 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.7□□□□□ -1.98
ZNF544Q6NX49 AL365361.1-201ENST00000566942 3481 ntBASIC2.7□□□□□ -1.98
ZNF544Q6NX49 SNORA14A-201ENST00000364773 135 ntBASIC2.7□□□□□ -1.98
ZNF544Q6NX49 SNORD51-201ENST00000384320 80 ntBASIC2.7□□□□□ -1.98
ZNF544Q6NX49 AL031679.1-201ENST00000400616 525 ntBASIC2.7□□□□□ -1.98
ZNF544Q6NX49 RNU6-920P-201ENST00000410926 92 ntBASIC2.7□□□□□ -1.98
ZNF544Q6NX49 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.7□□□□□ -1.98
ZNF544Q6NX49 AL590233.1-201ENST00000430017 456 ntBASIC2.7□□□□□ -1.98
ZNF544Q6NX49 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.7□□□□□ -1.98
ZNF544Q6NX49 RPL23AP20-201ENST00000447965 421 ntBASIC2.7□□□□□ -1.98
ZNF544Q6NX49 NANOGNBP1-201ENST00000448444 480 ntBASIC2.7□□□□□ -1.98
ZNF544Q6NX49 AC005297.2-201ENST00000450430 606 ntBASIC2.7□□□□□ -1.98
ZNF544Q6NX49 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.7□□□□□ -1.98
ZNF544Q6NX49 AP000705.1-201ENST00000454567 350 ntBASIC2.7□□□□□ -1.98
ZNF544Q6NX49 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.7□□□□□ -1.98
ZNF544Q6NX49 RN7SL297P-201ENST00000483161 293 ntBASIC2.7□□□□□ -1.98
ZNF544Q6NX49 AC011825.1-201ENST00000484967 388 ntBASIC2.7□□□□□ -1.98
ZNF544Q6NX49 AP001025.2-201ENST00000490908 477 ntBASIC2.7□□□□□ -1.98
ZNF544Q6NX49 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.7□□□□□ -1.98
ZNF544Q6NX49 AC024589.1-201ENST00000512207 263 ntBASIC2.7□□□□□ -1.98
ZNF544Q6NX49 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.7□□□□□ -1.98
ZNF544Q6NX49 AC107016.2-201ENST00000547968 190 ntBASIC2.7□□□□□ -1.98
ZNF544Q6NX49 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.7□□□□□ -1.98
ZNF544Q6NX49 EEF1B2P4-201ENST00000551398 348 ntBASIC2.7□□□□□ -1.98
ZNF544Q6NX49 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.7□□□□□ -1.98
ZNF544Q6NX49 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.7□□□□□ -1.98
ZNF544Q6NX49 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
ZNF544Q6NX49 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.7□□□□□ -1.98
ZNF544Q6NX49 AP001004.1-201ENST00000582468 324 ntBASIC2.7□□□□□ -1.98
ZNF544Q6NX49 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
ZNF544Q6NX49 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.7□□□□□ -1.98
ZNF544Q6NX49 AC010620.1-201ENST00000601088 1102 ntBASIC2.7□□□□□ -1.98
ZNF544Q6NX49 Z94722.1-201ENST00000604328 474 ntBASIC2.7□□□□□ -1.98
ZNF544Q6NX49 IGHV3-29-201ENST00000604817 344 ntBASIC2.7□□□□□ -1.98
ZNF544Q6NX49 AC105129.3-201ENST00000605455 485 ntBASIC2.7□□□□□ -1.98
ZNF544Q6NX49 AL390208.1-201ENST00000605885 644 ntBASIC2.7□□□□□ -1.98
ZNF544Q6NX49 AC093732.2-201ENST00000607950 274 ntBASIC2.7□□□□□ -1.98
ZNF544Q6NX49 AL110115.1-201ENST00000614396 364 ntBASIC2.7□□□□□ -1.98
ZNF544Q6NX49 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.7□□□□□ -1.98
ZNF544Q6NX49 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.7□□□□□ -1.98
ZNF544Q6NX49 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
ZNF544Q6NX49 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
ZNF544Q6NX49 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ZNF544Q6NX49 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ZNF544Q6NX49 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
ZNF544Q6NX49 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.69□□□□□ -1.98
ZNF544Q6NX49 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
ZNF544Q6NX49 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
ZNF544Q6NX49 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms