Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF43Q68DV7 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF43Q68DV7 AC130650.2-201ENST00000618736 2403 ntBASIC5.07□□□□□ -1.6
RNF43Q68DV7 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RNF43Q68DV7 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF43Q68DV7 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF43Q68DV7 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF43Q68DV7 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.07□□□□□ -1.6
RNF43Q68DV7 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF43Q68DV7 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RNF43Q68DV7 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
RNF43Q68DV7 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF43Q68DV7 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF43Q68DV7 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF43Q68DV7 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.06□□□□□ -1.6
RNF43Q68DV7 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RNF43Q68DV7 AC099654.2-201ENST00000433031 1980 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF43Q68DV7 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF43Q68DV7 SMG1P6-201ENST00000532337 2930 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
RNF43Q68DV7 Y_RNA.20-201ENST00000362479 113 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 RNU6-212P-201ENST00000362642 104 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 RNU6-1159P-201ENST00000362933 107 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
RNF43Q68DV7 RNU6-190P-201ENST00000384154 102 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 RNU6-842P-201ENST00000384269 107 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 SNORA16.2-201ENST00000390991 127 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RNF43Q68DV7 AC097374.1-203ENST00000400783 485 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 MIR298-201ENST00000401212 88 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 RNU2-14P-201ENST00000411053 191 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.06□□□□□ -1.6
RNF43Q68DV7 RPL21P109-201ENST00000422213 475 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 AC093106.2-201ENST00000428212 385 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 RPL23AP69-201ENST00000431134 458 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 AL353597.2-202ENST00000434901 373 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 AL359672.1-201ENST00000442302 409 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF43Q68DV7 RPS3AP12-201ENST00000443616 753 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 AC243772.1-201ENST00000451620 410 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 PCMTD1P1-201ENST00000455560 355 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 RN7SL517P-201ENST00000462240 305 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 AC011005.2-201ENST00000487324 359 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 AC026801.1-201ENST00000497178 464 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 AL139099.1-201ENST00000497398 403 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 AC083829.1-201ENST00000503756 657 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 AC093767.1-201ENST00000504523 156 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.06□□□□□ -1.6
RNF43Q68DV7 SNORA40.14-201ENST00000516543 86 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 RNU6-798P-201ENST00000516912 103 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.06□□□□□ -1.6
RNF43Q68DV7 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF43Q68DV7 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF43Q68DV7 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.06□□□□□ -1.6
RNF43Q68DV7 AC026371.1-201ENST00000551867 419 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 MIR4675-201ENST00000577898 77 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.06□□□□□ -1.6
RNF43Q68DV7 AC012443.1-201ENST00000605605 231 ntBASIC5.06□□□□□ -1.6
RNF43Q68DV7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC5.06□□□□□ -1.6
RNF43Q68DV7 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.06□□□□□ -1.6
RNF43Q68DV7 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.06□□□□□ -1.6
RNF43Q68DV7 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF43Q68DV7 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF43Q68DV7 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF43Q68DV7 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF43Q68DV7 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF43Q68DV7 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.06□□□□□ -1.6
RNF43Q68DV7 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RNF43Q68DV7 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF43Q68DV7 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF43Q68DV7 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF43Q68DV7 Z95327.2-201ENST00000414579 1873 ntBASIC5.05□□□□□ -1.6
RNF43Q68DV7 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF43Q68DV7 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF43Q68DV7 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF43Q68DV7 Y_RNA.416-201ENST00000384014 113 ntBASIC5.05□□□□□ -1.6
RNF43Q68DV7 SNORA70.10-201ENST00000384515 134 ntBASIC5.05□□□□□ -1.6
RNF43Q68DV7 AL592291.1-201ENST00000403830 352 ntBASIC5.05□□□□□ -1.6
RNF43Q68DV7 MIR1193-201ENST00000408109 78 ntBASIC5.05□□□□□ -1.6
RNF43Q68DV7 AL645608.4-201ENST00000423619 154 ntBASIC5.05□□□□□ -1.6
RNF43Q68DV7 AC092162.1-201ENST00000432828 434 ntBASIC5.05□□□□□ -1.6
RNF43Q68DV7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC5.05□□□□□ -1.6
RNF43Q68DV7 NOTCH2P1-201ENST00000443481 624 ntBASIC5.05□□□□□ -1.6
RNF43Q68DV7 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.05□□□□□ -1.6
RNF43Q68DV7 AC087879.1-201ENST00000474343 374 ntBASIC5.05□□□□□ -1.6
RNF43Q68DV7 AC005726.1-201ENST00000494679 427 ntBASIC5.05□□□□□ -1.6
RNF43Q68DV7 SCARNA22-201ENST00000503991 125 ntBASIC5.05□□□□□ -1.6
RNF43Q68DV7 AC096745.1-201ENST00000509945 370 ntBASIC5.05□□□□□ -1.6
RNF43Q68DV7 SNORA40.15-201ENST00000516884 107 ntBASIC5.05□□□□□ -1.6
RNF43Q68DV7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.05□□□□□ -1.6
RNF43Q68DV7 AL358913.1-201ENST00000554342 121 ntBASIC5.05□□□□□ -1.6
RNF43Q68DV7 AL121576.1-201ENST00000556055 276 ntBASIC5.05□□□□□ -1.6
RNF43Q68DV7 AL049839.1-201ENST00000556151 657 ntBASIC5.05□□□□□ -1.6
RNF43Q68DV7 AL133153.1-201ENST00000557756 303 ntBASIC5.05□□□□□ -1.6
RNF43Q68DV7 BNIP3P5-201ENST00000562290 498 ntBASIC5.05□□□□□ -1.6
RNF43Q68DV7 AC008521.1-201ENST00000587471 187 ntBASIC5.05□□□□□ -1.6
RNF43Q68DV7 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.05□□□□□ -1.6
RNF43Q68DV7 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.05□□□□□ -1.6
RNF43Q68DV7 ANKRD36BP1-201ENST00000358576 1779 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms