Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 SMG1P6-201ENST00000532337 2930 ntBASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HLA-DQA1Q5Y7H0 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 NEAT1-202ENST00000501122 22743 ntBASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 RNA5SP191-201ENST00000362585 102 ntBASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 RNU6-842P-201ENST00000384269 107 ntBASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 RNU1-82P-201ENST00000390851 165 ntBASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 MIR298-201ENST00000401212 88 ntBASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 RPL7AP73-201ENST00000413490 353 ntBASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 RNU7-187P-201ENST00000458985 68 ntBASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 RNU6-953P-201ENST00000459154 107 ntBASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 RPL21P41-201ENST00000459863 264 ntBASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC023424.1-201ENST00000496058 459 ntBASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 RNA5SP392-201ENST00000516905 112 ntBASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 MIR5699-201ENST00000578903 90 ntBASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 MIR4737-201ENST00000583979 81 ntBASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC024940.4-201ENST00000605507 246 ntBASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 FAM25E-202ENST00000608562 189 ntBASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 Mico1.1-201ENST00000611698 204 ntBASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 AL442067.1-201ENST00000613261 223 ntBASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 U73479.1-201ENST00000618062 168 ntBASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC091953.3-201ENST00000623220 236 ntBASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC093849.1-201ENST00000563631 2209 ntBASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQA1Q5Y7H0 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 RN7SKP115-201ENST00000363177 317 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 Y_RNA.151-201ENST00000363566 112 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 RNU6-450P-201ENST00000364654 107 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 SNORA63.7-201ENST00000365579 123 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 MIR153-1-201ENST00000384914 90 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 RNU6-55P-201ENST00000411092 107 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC011933.1-201ENST00000413334 321 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 AL445487.1-201ENST00000415694 1580 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 MRPS18CP6-201ENST00000423587 223 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 EIF4HP2-201ENST00000424380 563 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 USP9YP16-201ENST00000430287 407 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC016831.4-201ENST00000438302 307 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 NOTCH2P1-201ENST00000443481 624 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 HSFY6P-201ENST00000445573 403 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 FTH1P25-201ENST00000447665 469 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 RPL7L1P1-201ENST00000448259 785 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 USP9YP23-201ENST00000455085 407 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC026979.1-201ENST00000492525 396 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC116655.1-201ENST00000508324 901 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC091868.1-201ENST00000508746 304 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 SNORA31.3-201ENST00000516029 96 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 SNORA31.22-201ENST00000517204 135 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 RNU6-840P-201ENST00000517275 65 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 ERHP1-201ENST00000523006 310 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 AL161713.1-201ENST00000555538 145 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC093249.4-201ENST00000564755 259 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 RPL23AP87-202ENST00000573039 466 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC005951.2-201ENST00000576282 495 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 RN7SL652P-201ENST00000577769 300 ntBASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DQA1Q5Y7H0 ELOCP5-201ENST00000604924 333 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms