Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 RNA5SP183-201ENST00000362452 119 ntBASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 RNU1-19P-201ENST00000363306 165 ntBASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 SNORD1C-201ENST00000363315 78 ntBASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 Y_RNA.217-201ENST00000364214 105 ntBASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 Y_RNA.238-201ENST00000364441 102 ntBASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 Y_RNA.446-201ENST00000384178 104 ntBASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 RNU4-34P-201ENST00000410431 124 ntBASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 AL390729.2-201ENST00000416137 156 ntBASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 AC024067.1-201ENST00000426199 223 ntBASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 CRIP1P1-201ENST00000427567 185 ntBASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 CYCSP6-201ENST00000434498 302 ntBASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 AC074290.1-201ENST00000448883 135 ntBASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 AL356981.1-201ENST00000454879 684 ntBASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 Y_RNA.641-201ENST00000459414 105 ntBASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 AC073901.1-201ENST00000462471 408 ntBASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 RN7SL30P-201ENST00000488416 306 ntBASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 SNORA31.3-201ENST00000516029 96 ntBASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 RNU6-659P-201ENST00000516454 104 ntBASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 AC090281.1-201ENST00000523019 276 ntBASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 MIR4311-201ENST00000580794 100 ntBASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 AC005191.1-201ENST00000603950 358 ntBASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 AC100778.3-201ENST00000580060 1750 ntBASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNFT1Q5M7Z0 SAGE4P-201ENST00000442271 3381 ntBASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 AC109446.4-201ENST00000623235 2755 ntBASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 AC018809.2-201ENST00000602436 3823 ntBASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 OR9K1P-202ENST00000641111 3217 ntBASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 LINC01963-201ENST00000562038 3148 ntBASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 SNORA16A-201ENST00000384342 137 ntBASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 MIR513C-201ENST00000401352 84 ntBASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 EBAG9P1-201ENST00000418955 543 ntBASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 RPL23AP58-201ENST00000440453 469 ntBASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 AL354710.1-201ENST00000453641 246 ntBASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 AC005532.2-201ENST00000467154 373 ntBASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 AC006499.3-201ENST00000506077 748 ntBASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 SNORA25.12-201ENST00000516202 82 ntBASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 Y_RNA.694-201ENST00000516677 117 ntBASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 AC126177.5-201ENST00000549599 178 ntBASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 AC044860.2-201ENST00000561005 179 ntBASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 AC025588.3-201ENST00000604182 274 ntBASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 AC140134.1-201ENST00000511830 3544 ntBASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNFT1Q5M7Z0 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 BTBD10P1-201ENST00000549824 1352 ntBASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 RNA5SP335-201ENST00000363817 110 ntBASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 RNU6-476P-201ENST00000384726 107 ntBASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 AC005042.1-201ENST00000393397 800 ntBASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 AL139148.1-201ENST00000427122 680 ntBASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 AL512844.2-201ENST00000433990 593 ntBASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 HIGD1AP2-201ENST00000446367 280 ntBASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 AC073587.1-201ENST00000447093 876 ntBASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.04□□□□□ -1.6
RNFT1Q5M7Z0 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms