Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 RNU6-1011P-201ENST00000384668 107 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 MIR34B-201ENST00000385076 84 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 RNU6-278P-201ENST00000390945 109 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 RNU6-1009P-201ENST00000390996 107 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 SNORA3.3-201ENST00000408712 125 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 RN7SKP285-201ENST00000410137 318 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 RNU2-43P-201ENST00000410306 190 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 RNA5SP107-201ENST00000411358 122 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 AC068533.1-201ENST00000418542 415 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 AL353193.1-201ENST00000421444 268 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 USP9YP7-201ENST00000436723 430 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 AF228730.2-201ENST00000438784 848 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 AL138799.3-201ENST00000438968 350 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 RPS15AP9-201ENST00000439856 381 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 USP9YP32-201ENST00000452432 430 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 AL645939.1-201ENST00000453429 797 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 RAD23BP3-201ENST00000454157 1152 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 MTCO2P29-201ENST00000465212 189 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 AC114786.4-201ENST00000508771 728 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 Vault.1-201ENST00000516474 102 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 AC090572.1-201ENST00000519251 160 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 AC008489.1-201ENST00000524271 483 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 AP000889.1-201ENST00000530968 660 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 AC091516.1-201ENST00000549191 703 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 AL157687.1-201ENST00000554853 619 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 AC025678.1-201ENST00000567861 338 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 Z84480.1-201ENST00000605131 311 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 AC012603.1-201ENST00000606424 528 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 AC096577.2-201ENST00000611455 153 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 AL136964.1-201ENST00000622038 2990 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 RPS4XP5-202ENST00000449995 1334 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.14□□□□□ -1.75
SLC44A4Q53GD3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 AC007685.1-201ENST00000329806 452 ntBASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 RNY1P12-201ENST00000364251 105 ntBASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 SNORA5A-201ENST00000384111 134 ntBASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 U8.11-201ENST00000384699 133 ntBASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 U8.12-201ENST00000384701 133 ntBASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 RPL21P111-201ENST00000418453 477 ntBASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 AL358472.1-201ENST00000431295 329 ntBASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 AC004866.2-201ENST00000438285 481 ntBASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 AC093156.1-201ENST00000440382 670 ntBASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 AC005094.1-201ENST00000440420 368 ntBASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 U8.18-201ENST00000459285 133 ntBASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 AL049714.1-201ENST00000466686 347 ntBASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 AC010285.1-201ENST00000470580 392 ntBASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 RPS29P25-201ENST00000481709 171 ntBASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 AC023194.1-201ENST00000493084 308 ntBASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 RPL29P14-201ENST00000495837 428 ntBASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 AC018710.1-201ENST00000506509 158 ntBASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 AC110768.1-201ENST00000509222 400 ntBASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 ARL2BPP2-201ENST00000550907 489 ntBASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 157.7 ms