Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC009831.4-201ENST00000620744 325 ntBASIC1.47□□□□□ -2.17
CKS1BP61024 AC024595.1-201ENST00000623088 387 ntBASIC1.47□□□□□ -2.17
CKS1BP61024 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
CKS1BP61024 AL355596.1-201ENST00000565399 3996 ntBASIC1.46□□□□□ -2.18
CKS1BP61024 AC062016.1-201ENST00000355719 319 ntBASIC1.46□□□□□ -2.18
CKS1BP61024 RNA5SP276-201ENST00000362580 94 ntBASIC1.46□□□□□ -2.18
CKS1BP61024 SNORA23-201ENST00000365128 182 ntBASIC1.46□□□□□ -2.18
CKS1BP61024 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CKS1BP61024 RNU6-891P-201ENST00000384280 111 ntBASIC1.46□□□□□ -2.18
CKS1BP61024 RNU6-997P-201ENST00000384725 107 ntBASIC1.46□□□□□ -2.18
CKS1BP61024 ATP5F1P6-201ENST00000402768 767 ntBASIC1.46□□□□□ -2.18
CKS1BP61024 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.46□□□□□ -2.18
CKS1BP61024 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.46□□□□□ -2.18
CKS1BP61024 AL158823.1-201ENST00000418441 478 ntBASIC1.46□□□□□ -2.18
CKS1BP61024 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CKS1BP61024 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.46□□□□□ -2.18
CKS1BP61024 HSPE1P21-201ENST00000438283 308 ntBASIC1.46□□□□□ -2.18
CKS1BP61024 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.46□□□□□ -2.18
CKS1BP61024 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.46□□□□□ -2.18
CKS1BP61024 DDX3P2-201ENST00000446138 111 ntBASIC1.46□□□□□ -2.18
CKS1BP61024 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.46□□□□□ -2.18
CKS1BP61024 AL121769.1-201ENST00000469473 401 ntBASIC1.46□□□□□ -2.18
CKS1BP61024 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.46□□□□□ -2.18
CKS1BP61024 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.46□□□□□ -2.18
CKS1BP61024 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.46□□□□□ -2.18
CKS1BP61024 HAUS1P3-201ENST00000523909 662 ntBASIC1.46□□□□□ -2.18
CKS1BP61024 OR5AK1P-201ENST00000524837 922 ntBASIC1.46□□□□□ -2.18
CKS1BP61024 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.46□□□□□ -2.18
CKS1BP61024 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CKS1BP61024 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.46□□□□□ -2.18
CKS1BP61024 LARP7P3-201ENST00000579888 337 ntBASIC1.46□□□□□ -2.18
CKS1BP61024 CBX3P2-202ENST00000583365 535 ntBASIC1.46□□□□□ -2.18
CKS1BP61024 AC008121.1-201ENST00000603244 268 ntBASIC1.46□□□□□ -2.18
CKS1BP61024 AC068276.1-201ENST00000605793 379 ntBASIC1.46□□□□□ -2.18
CKS1BP61024 AC008498.1-201ENST00000613012 531 ntBASIC1.46□□□□□ -2.18
CKS1BP61024 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
CKS1BP61024 AL356585.4-201ENST00000623078 1229 ntBASIC1.46□□□□□ -2.18
CKS1BP61024 AC109454.4-201ENST00000623411 649 ntBASIC1.46□□□□□ -2.18
CKS1BP61024 AC006386.2-201ENST00000624491 75 ntBASIC1.46□□□□□ -2.18
CKS1BP61024 AC012005.1-201ENST00000624575 75 ntBASIC1.46□□□□□ -2.18
CKS1BP61024 AL160394.1-201ENST00000624765 724 ntBASIC1.46□□□□□ -2.18
CKS1BP61024 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.46□□□□□ -2.18
CKS1BP61024 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.46□□□□□ -2.18
CKS1BP61024 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
CKS1BP61024 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CKS1BP61024 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.45□□□□□ -2.18
CKS1BP61024 RNU6-543P-201ENST00000362576 108 ntBASIC1.45□□□□□ -2.18
CKS1BP61024 MIR491-201ENST00000384877 84 ntBASIC1.45□□□□□ -2.18
CKS1BP61024 ZNF92P1Y-201ENST00000415010 1191 ntBASIC1.45□□□□□ -2.18
CKS1BP61024 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.45□□□□□ -2.18
CKS1BP61024 NUP35P1-201ENST00000422734 947 ntBASIC1.45□□□□□ -2.18
CKS1BP61024 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.45□□□□□ -2.18
CKS1BP61024 AL353729.1-201ENST00000425044 720 ntBASIC1.45□□□□□ -2.18
CKS1BP61024 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.45□□□□□ -2.18
CKS1BP61024 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.45□□□□□ -2.18
CKS1BP61024 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.45□□□□□ -2.18
CKS1BP61024 RPL7P18-201ENST00000478965 734 ntBASIC1.45□□□□□ -2.18
CKS1BP61024 AC138853.1-201ENST00000503549 823 ntBASIC1.45□□□□□ -2.18
CKS1BP61024 LTV1P1-201ENST00000510683 1237 ntBASIC1.45□□□□□ -2.18
CKS1BP61024 RNA5SP200-201ENST00000516360 103 ntBASIC1.45□□□□□ -2.18
CKS1BP61024 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.45□□□□□ -2.18
CKS1BP61024 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.45□□□□□ -2.18
CKS1BP61024 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.45□□□□□ -2.18
CKS1BP61024 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.45□□□□□ -2.18
CKS1BP61024 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.45□□□□□ -2.18
CKS1BP61024 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.45□□□□□ -2.18
CKS1BP61024 AL049838.1-201ENST00000563647 981 ntBASIC1.45□□□□□ -2.18
CKS1BP61024 VN1R92P-201ENST00000598511 928 ntBASIC1.45□□□□□ -2.18
CKS1BP61024 AC009314.1-201ENST00000603871 304 ntBASIC1.45□□□□□ -2.18
CKS1BP61024 AC126118.1-201ENST00000607744 628 ntBASIC1.45□□□□□ -2.18
CKS1BP61024 AL773524.1-201ENST00000614065 229 ntBASIC1.45□□□□□ -2.18
CKS1BP61024 AC104307.1-201ENST00000616142 196 ntBASIC1.45□□□□□ -2.18
CKS1BP61024 AC025034.2-201ENST00000623264 286 ntBASIC1.45□□□□□ -2.18
CKS1BP61024 AC098679.5-201ENST00000624394 571 ntBASIC1.45□□□□□ -2.18
CKS1BP61024 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.45□□□□□ -2.18
CKS1BP61024 CTSLP2-204ENST00000629029 392 ntBASIC1.45□□□□□ -2.18
CKS1BP61024 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.45□□□□□ -2.18
CKS1BP61024 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CKS1BP61024 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CKS1BP61024 AC008432.1-201ENST00000615912 1320 ntBASIC1.44□□□□□ -2.18
CKS1BP61024 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.44□□□□□ -2.18
CKS1BP61024 SNORA5B-201ENST00000363786 132 ntBASIC1.44□□□□□ -2.18
CKS1BP61024 RNA5SP160-201ENST00000364866 120 ntBASIC1.44□□□□□ -2.18
CKS1BP61024 MIR221-201ENST00000385135 110 ntBASIC1.44□□□□□ -2.18
CKS1BP61024 SNORA48.2-201ENST00000390926 124 ntBASIC1.44□□□□□ -2.18
CKS1BP61024 RNU6-750P-201ENST00000390946 107 ntBASIC1.44□□□□□ -2.18
CKS1BP61024 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.44□□□□□ -2.18
CKS1BP61024 NDUFB4P4-201ENST00000404822 243 ntBASIC1.44□□□□□ -2.18
CKS1BP61024 RNU6-564P-201ENST00000410983 104 ntBASIC1.44□□□□□ -2.18
CKS1BP61024 EDDM3CP-201ENST00000415977 425 ntBASIC1.44□□□□□ -2.18
CKS1BP61024 PAICSP7-201ENST00000419829 962 ntBASIC1.44□□□□□ -2.18
CKS1BP61024 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.44□□□□□ -2.18
CKS1BP61024 AC233981.1-201ENST00000423224 461 ntBASIC1.44□□□□□ -2.18
CKS1BP61024 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.44□□□□□ -2.18
CKS1BP61024 AL049734.2-201ENST00000441066 616 ntBASIC1.44□□□□□ -2.18
CKS1BP61024 RPL7P12-201ENST00000446719 750 ntBASIC1.44□□□□□ -2.18
CKS1BP61024 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.44□□□□□ -2.18
CKS1BP61024 AC005297.2-201ENST00000450430 606 ntBASIC1.44□□□□□ -2.18
CKS1BP61024 AC027575.1-201ENST00000481064 460 ntBASIC1.44□□□□□ -2.18
CKS1BP61024 AC104685.1-201ENST00000502445 371 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms