Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 Y_RNA.184-201ENST00000363884 108 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 RNA5SP505-201ENST00000364748 108 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 RNU6-339P-201ENST00000384310 107 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 SNORD51-201ENST00000384320 80 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 SNORA37-201ENST00000384504 129 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 MIR514A2-201ENST00000385131 88 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 MIR514A3-201ENST00000385132 88 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 MIR454-201ENST00000390180 115 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AL590704.1-201ENST00000402856 794 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 Y_RNA.615-201ENST00000410769 117 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 RNU2-62P-201ENST00000410868 191 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 IFNA20P-201ENST00000436840 528 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 ARL2BPP10-201ENST00000446487 531 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 MTND3P16-201ENST00000452205 344 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AC108059.3-201ENST00000456388 214 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AC053481.1-201ENST00000467217 306 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 RPL21P103-201ENST00000479921 488 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 RPL31P61-201ENST00000496160 376 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AC026427.2-201ENST00000506228 536 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AC105417.1-201ENST00000514691 285 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 RNU6-798P-201ENST00000516912 103 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AC093331.1-201ENST00000521474 169 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AP005435.4-201ENST00000529514 284 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AL133271.1-201ENST00000538229 291 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AC128657.1-201ENST00000549459 145 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 GNRHR2P1-201ENST00000555315 631 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AL133153.1-201ENST00000557756 303 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 RPL21P12-201ENST00000559810 515 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AC006270.2-201ENST00000578523 652 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 MIR4742-201ENST00000581069 85 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 MIR4697-201ENST00000582977 78 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AC022432.1-201ENST00000595739 310 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AC243960.4-201ENST00000600532 288 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AC078795.3-201ENST00000602913 472 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AC104662.1-201ENST00000604448 511 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 RNU6-89P-201ENST00000606519 100 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 MIR378J-201ENST00000611988 109 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 RMST_7.1-201ENST00000621935 268 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AL160413.1-201ENST00000622780 310 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AC006065.5-201ENST00000623427 349 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AL136313.1-201ENST00000624804 202 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AL773545.4-201ENST00000637262 310 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 MIR7153-201ENST00000637758 57 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 MIR1302-1-201ENST00000637932 143 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AL513478.4-201ENST00000641636 310 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 AC004972.1-201ENST00000623934 2209 ntBASIC3.2□□□□□ -1.9
ERVFC1-1P60608 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ERVFC1-1P60608 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 ZNF734P-201ENST00000419494 1534 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 USP8P1-201ENST00000494673 3183 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 AL590240.1-201ENST00000334118 313 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 Y_RNA.67-201ENST00000362870 100 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 RNA5SP175-201ENST00000364275 119 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 RNU6-1227P-201ENST00000383981 107 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 MIR184-201ENST00000384962 84 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 RNU6-193P-201ENST00000410977 107 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 MTND3P8-201ENST00000412909 339 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms