Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
FOXG1P55316 AC018630.1-201ENST00000541376 925 ntBASIC3.53□□□□□ -1.84
FOXG1P55316 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.53□□□□□ -1.84
FOXG1P55316 OR4T1P-201ENST00000554933 911 ntBASIC3.53□□□□□ -1.84
FOXG1P55316 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.53□□□□□ -1.84
FOXG1P55316 APOOP1-201ENST00000604695 592 ntBASIC3.53□□□□□ -1.84
FOXG1P55316 AC010680.4-201ENST00000605334 543 ntBASIC3.53□□□□□ -1.84
FOXG1P55316 AC011373.1-201ENST00000607270 237 ntBASIC3.53□□□□□ -1.84
FOXG1P55316 uc_338.32-201ENST00000615087 172 ntBASIC3.53□□□□□ -1.84
FOXG1P55316 MIR6500-201ENST00000622700 86 ntBASIC3.53□□□□□ -1.84
FOXG1P55316 AC091925.1-201ENST00000623204 462 ntBASIC3.53□□□□□ -1.84
FOXG1P55316 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.53□□□□□ -1.84
FOXG1P55316 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.53□□□□□ -1.84
FOXG1P55316 AC119674.1-207ENST00000641355 633 ntBASIC3.53□□□□□ -1.84
FOXG1P55316 MTND5P28-201ENST00000438005 1594 ntBASIC3.53□□□□□ -1.84
FOXG1P55316 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
FOXG1P55316 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
FOXG1P55316 AP004289.2-201ENST00000444413 1457 ntBASIC3.53□□□□□ -1.84
FOXG1P55316 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
FOXG1P55316 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.53□□□□□ -1.85
FOXG1P55316 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
FOXG1P55316 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
FOXG1P55316 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
FOXG1P55316 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
FOXG1P55316 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
FOXG1P55316 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
FOXG1P55316 AC011266.1-201ENST00000624119 3569 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
FOXG1P55316 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
FOXG1P55316 SNORA60-201ENST00000362396 134 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 RNA5SP52-201ENST00000362448 134 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 Y_RNA.126-201ENST00000363382 111 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 RNA5SP399-201ENST00000364003 117 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 RN7SKP280-201ENST00000364196 304 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 Y_RNA.301-201ENST00000364990 103 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 RNU6-1293P-201ENST00000384077 107 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 MIR513A2-201ENST00000385249 127 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 RNY4P36-201ENST00000391116 96 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
FOXG1P55316 RNU2-21P-201ENST00000410368 188 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 RNU6-628P-201ENST00000410675 107 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.52□□□□□ -1.85
FOXG1P55316 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.52□□□□□ -1.85
FOXG1P55316 CYP4F29P-201ENST00000420685 446 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 AC092832.1-201ENST00000422934 400 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
FOXG1P55316 PMCHL1-202ENST00000423102 261 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.52□□□□□ -1.85
FOXG1P55316 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.52□□□□□ -1.85
FOXG1P55316 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.52□□□□□ -1.85
FOXG1P55316 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.52□□□□□ -1.85
FOXG1P55316 RPL32P28-201ENST00000443577 397 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 AC079781.2-201ENST00000446424 169 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 AC005297.2-201ENST00000450430 606 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 AL356010.1-201ENST00000456364 102 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 MTCO2P29-201ENST00000465212 189 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 RPS20P21-201ENST00000466859 343 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 AC104563.1-201ENST00000476147 376 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 AC017037.1-201ENST00000508460 471 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.52□□□□□ -1.85
FOXG1P55316 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
FOXG1P55316 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.52□□□□□ -1.85
FOXG1P55316 Y_RNA.720-201ENST00000517166 92 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.52□□□□□ -1.85
FOXG1P55316 AP003497.1-201ENST00000528472 562 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.52□□□□□ -1.85
FOXG1P55316 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.52□□□□□ -1.85
FOXG1P55316 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
FOXG1P55316 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.52□□□□□ -1.85
FOXG1P55316 RN7SL703P-201ENST00000578485 302 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.52□□□□□ -1.85
FOXG1P55316 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.52□□□□□ -1.85
FOXG1P55316 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
FOXG1P55316 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.52□□□□□ -1.85
FOXG1P55316 XIAPP1-201ENST00000603162 600 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 AC091167.4-201ENST00000605079 184 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 AC012603.1-201ENST00000606424 528 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.52□□□□□ -1.85
FOXG1P55316 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
FOXG1P55316 RNU6-156P-201ENST00000621869 107 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
FOXG1P55316 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.52□□□□□ -1.85
FOXG1P55316 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.52□□□□□ -1.85
FOXG1P55316 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.52□□□□□ -1.85
FOXG1P55316 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
FOXG1P55316 MTND4P1-201ENST00000457501 1466 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
FOXG1P55316 AC097504.1-201ENST00000515103 2415 ntBASIC3.52□□□□□ -1.85
FOXG1P55316 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
FOXG1P55316 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
FOXG1P55316 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.51□□□□□ -1.85
FOXG1P55316 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
FOXG1P55316 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
FOXG1P55316 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
FOXG1P55316 XIAPP3-201ENST00000312918 795 ntBASIC3.51□□□□□ -1.85
FOXG1P55316 Y_RNA.197-201ENST00000364004 102 ntBASIC3.51□□□□□ -1.85
FOXG1P55316 Y_RNA.395-201ENST00000383945 109 ntBASIC3.51□□□□□ -1.85
FOXG1P55316 RNU6-921P-201ENST00000384361 107 ntBASIC3.51□□□□□ -1.85
FOXG1P55316 RNU6-505P-201ENST00000384427 107 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 7.7 ms