Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RNA5SP252-201ENST00000391131 119 ntBASIC1.89□□□□□ -2.11
NUP98P52948 AL356057.2-201ENST00000403318 432 ntBASIC1.89□□□□□ -2.11
NUP98P52948 MTCO3P12-201ENST00000416718 547 ntBASIC1.89□□□□□ -2.11
NUP98P52948 PAICSP7-201ENST00000419829 962 ntBASIC1.89□□□□□ -2.11
NUP98P52948 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.89□□□□□ -2.11
NUP98P52948 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.89□□□□□ -2.11
NUP98P52948 RBM43P1-201ENST00000476891 1081 ntBASIC1.89□□□□□ -2.11
NUP98P52948 AC087441.2-201ENST00000529141 262 ntBASIC1.89□□□□□ -2.11
NUP98P52948 AL512598.1-201ENST00000610158 273 ntBASIC1.89□□□□□ -2.11
NUP98P52948 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
NUP98P52948 AC006026.1-201ENST00000444025 1803 ntBASIC1.89□□□□□ -2.11
NUP98P52948 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.89□□□□□ -2.11
NUP98P52948 DSTNP4-201ENST00000399472 474 ntBASIC1.89□□□□□ -2.11
NUP98P52948 SUMO2P12-201ENST00000405924 140 ntBASIC1.89□□□□□ -2.11
NUP98P52948 RNU2-25P-201ENST00000411041 191 ntBASIC1.89□□□□□ -2.11
NUP98P52948 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.89□□□□□ -2.11
NUP98P52948 SUMO1P4-201ENST00000429430 302 ntBASIC1.89□□□□□ -2.11
NUP98P52948 GTF2IP7-202ENST00000436677 309 ntBASIC1.89□□□□□ -2.11
NUP98P52948 RPS15AP7-201ENST00000439294 405 ntBASIC1.89□□□□□ -2.11
NUP98P52948 AC092473.1-201ENST00000441098 221 ntBASIC1.89□□□□□ -2.11
NUP98P52948 TAF9P1-201ENST00000445421 515 ntBASIC1.89□□□□□ -2.11
NUP98P52948 TAF9P2-201ENST00000454958 515 ntBASIC1.89□□□□□ -2.11
NUP98P52948 RPS20P24-201ENST00000457473 361 ntBASIC1.89□□□□□ -2.11
NUP98P52948 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.89□□□□□ -2.11
NUP98P52948 AC025016.1-201ENST00000616746 682 ntBASIC1.89□□□□□ -2.11
NUP98P52948 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NUP98P52948 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NUP98P52948 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
NUP98P52948 MIR1287-201ENST00000408492 90 ntBASIC1.88□□□□□ -2.11
NUP98P52948 POLHP1-201ENST00000411806 470 ntBASIC1.88□□□□□ -2.11
NUP98P52948 AC010385.1-201ENST00000412374 256 ntBASIC1.88□□□□□ -2.11
NUP98P52948 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.88□□□□□ -2.11
NUP98P52948 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NUP98P52948 RPL36AP21-201ENST00000490372 323 ntBASIC1.88□□□□□ -2.11
NUP98P52948 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.88□□□□□ -2.11
NUP98P52948 MTCO3P44-201ENST00000510977 541 ntBASIC1.88□□□□□ -2.11
NUP98P52948 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.88□□□□□ -2.11
NUP98P52948 AC012493.3-201ENST00000604494 112 ntBASIC1.88□□□□□ -2.11
NUP98P52948 NUTF2P8-201ENST00000604593 363 ntBASIC1.88□□□□□ -2.11
NUP98P52948 AC018618.2-201ENST00000604770 446 ntBASIC1.88□□□□□ -2.11
NUP98P52948 AC079610.2-201ENST00000604818 690 ntBASIC1.88□□□□□ -2.11
NUP98P52948 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
NUP98P52948 AL360181.4-201ENST00000621752 134 ntBASIC1.88□□□□□ -2.11
NUP98P52948 AC097372.4-201ENST00000625025 466 ntBASIC1.88□□□□□ -2.11
NUP98P52948 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.87□□□□□ -2.11
NUP98P52948 AL139276.1-201ENST00000311910 1001 ntBASIC1.87□□□□□ -2.11
NUP98P52948 RNA5SP258-201ENST00000362750 119 ntBASIC1.87□□□□□ -2.11
NUP98P52948 RNU4-52P-201ENST00000384209 138 ntBASIC1.87□□□□□ -2.11
NUP98P52948 Y_RNA.493-201ENST00000384422 102 ntBASIC1.87□□□□□ -2.11
NUP98P52948 MT-TC-201ENST00000387405 66 ntBASIC1.87□□□□□ -2.11
NUP98P52948 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
NUP98P52948 RNA5SP56-201ENST00000410277 118 ntBASIC1.87□□□□□ -2.11
NUP98P52948 RPS15AP38-201ENST00000413110 372 ntBASIC1.87□□□□□ -2.11
NUP98P52948 HMGN2P19-201ENST00000425149 265 ntBASIC1.87□□□□□ -2.11
NUP98P52948 UBE2V1P6-201ENST00000430840 422 ntBASIC1.87□□□□□ -2.11
NUP98P52948 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.87□□□□□ -2.11
NUP98P52948 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.87□□□□□ -2.11
NUP98P52948 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.87□□□□□ -2.11
NUP98P52948 NAP1L1P3-201ENST00000462291 880 ntBASIC1.87□□□□□ -2.11
NUP98P52948 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.87□□□□□ -2.11
NUP98P52948 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.87□□□□□ -2.11
NUP98P52948 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.87□□□□□ -2.11
NUP98P52948 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.87□□□□□ -2.11
NUP98P52948 AL161734.1-201ENST00000609720 557 ntBASIC1.87□□□□□ -2.11
NUP98P52948 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.87□□□□□ -2.11
NUP98P52948 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.87□□□□□ -2.11
NUP98P52948 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
NUP98P52948 AC135776.4-201ENST00000624300 1904 ntBASIC1.87□□□□□ -2.11
NUP98P52948 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.87□□□□□ -2.11
NUP98P52948 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
NUP98P52948 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.87□□□□□ -2.11
NUP98P52948 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
NUP98P52948 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.87□□□□□ -2.11
NUP98P52948 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
NUP98P52948 RNU6-712P-201ENST00000410558 100 ntBASIC1.87□□□□□ -2.11
NUP98P52948 RNU6-193P-201ENST00000410977 107 ntBASIC1.87□□□□□ -2.11
NUP98P52948 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.87□□□□□ -2.11
NUP98P52948 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.87□□□□□ -2.11
NUP98P52948 MTND1P23-201ENST00000416931 372 ntBASIC1.87□□□□□ -2.11
NUP98P52948 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.87□□□□□ -2.11
NUP98P52948 AL354695.1-201ENST00000427935 228 ntBASIC1.87□□□□□ -2.11
NUP98P52948 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
NUP98P52948 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.87□□□□□ -2.11
NUP98P52948 MED28P6-201ENST00000558776 231 ntBASIC1.87□□□□□ -2.11
NUP98P52948 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.87□□□□□ -2.11
NUP98P52948 AC106900.2-201ENST00000604994 317 ntBASIC1.87□□□□□ -2.11
NUP98P52948 AL136363.1-201ENST00000605349 337 ntBASIC1.87□□□□□ -2.11
NUP98P52948 AC068944.2-201ENST00000610373 403 ntBASIC1.87□□□□□ -2.11
NUP98P52948 AC068880.5-201ENST00000624331 290 ntBASIC1.87□□□□□ -2.11
NUP98P52948 AC103710.2-202ENST00000641454 2853 ntBASIC1.86□□□□□ -2.11
NUP98P52948 AL391987.6-201ENST00000305671 199 ntBASIC1.86□□□□□ -2.11
NUP98P52948 RPS15AP12-201ENST00000419498 388 ntBASIC1.86□□□□□ -2.11
NUP98P52948 AC234781.2-201ENST00000426370 994 ntBASIC1.86□□□□□ -2.11
NUP98P52948 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.86□□□□□ -2.11
NUP98P52948 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
NUP98P52948 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.86□□□□□ -2.11
NUP98P52948 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.86□□□□□ -2.11
NUP98P52948 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.86□□□□□ -2.11
NUP98P52948 UBBP3-201ENST00000445497 241 ntBASIC1.86□□□□□ -2.11
NUP98P52948 AC068135.1-201ENST00000446164 246 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms