Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.6□□□□□ -1.83
CLCN3P51790 AC007687.1-201ENST00000602704 304 ntBASIC3.6□□□□□ -1.83
CLCN3P51790 AC091805.2-201ENST00000603848 235 ntBASIC3.6□□□□□ -1.83
CLCN3P51790 uc_338.1-201ENST00000612113 180 ntBASIC3.6□□□□□ -1.83
CLCN3P51790 AL589743.7-201ENST00000612637 233 ntBASIC3.6□□□□□ -1.83
CLCN3P51790 AC092794.1-201ENST00000612734 582 ntBASIC3.6□□□□□ -1.83
CLCN3P51790 AL157817.1-201ENST00000614264 790 ntBASIC3.6□□□□□ -1.83
CLCN3P51790 AC027807.2-201ENST00000616099 408 ntBASIC3.6□□□□□ -1.83
CLCN3P51790 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.6□□□□□ -1.83
CLCN3P51790 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLCN3P51790 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.6□□□□□ -1.83
CLCN3P51790 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.59□□□□□ -1.83
CLCN3P51790 AC017071.1-201ENST00000564407 2204 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 AL353743.1-202ENST00000431724 1695 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLCN3P51790 Y_RNA.6-201ENST00000362350 114 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 Y_RNA.46-201ENST00000362695 102 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 RNU6-173P-201ENST00000364215 104 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.59□□□□□ -1.83
CLCN3P51790 RNU6-533P-201ENST00000384144 107 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CLCN3P51790 SNORA48.5-201ENST00000391143 135 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 RNU6-754P-201ENST00000391166 107 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 AL136372.1-201ENST00000403060 228 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 MTCYBP36-201ENST00000404146 440 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 RPL7P25-201ENST00000404151 721 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 Y_RNA.608-201ENST00000410647 95 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 RNU2-71P-201ENST00000411395 189 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.59□□□□□ -1.83
CLCN3P51790 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLCN3P51790 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLCN3P51790 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.59□□□□□ -1.83
CLCN3P51790 AC233728.2-201ENST00000425348 757 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 AL353777.1-201ENST00000425552 326 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 RPL21P66-201ENST00000426566 466 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.59□□□□□ -1.83
CLCN3P51790 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.59□□□□□ -1.83
CLCN3P51790 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.59□□□□□ -1.83
CLCN3P51790 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.59□□□□□ -1.83
CLCN3P51790 RN7SL863P-201ENST00000462370 296 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 RPL21P104-201ENST00000464143 478 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 AC109925.1-201ENST00000478069 331 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 RPL9P33-201ENST00000484311 566 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 AC006445.1-201ENST00000491925 405 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
CLCN3P51790 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
CLCN3P51790 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.59□□□□□ -1.83
CLCN3P51790 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
CLCN3P51790 AC109464.2-201ENST00000510242 943 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 FTH1P9-201ENST00000513251 355 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 RNU2-58P-201ENST00000516403 183 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CLCN3P51790 AC022878.1-201ENST00000530684 149 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.59□□□□□ -1.83
CLCN3P51790 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.59□□□□□ -1.83
CLCN3P51790 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.59□□□□□ -1.83
CLCN3P51790 MIR3690-201ENST00000580266 75 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 MTATP6P3-201ENST00000581686 676 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 AC011471.1-201ENST00000585766 187 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 AP001429.1-201ENST00000602568 530 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 AL022099.1-201ENST00000604551 712 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.59□□□□□ -1.83
CLCN3P51790 SNORD39.4-201ENST00000620099 78 ntBASIC3.59□□□□□ -1.83
CLCN3P51790 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLCN3P51790 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.84
CLCN3P51790 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CLCN3P51790 AC093536.2-201ENST00000565257 1406 ntBASIC3.59□□□□□ -1.84
CLCN3P51790 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CLCN3P51790 AC092447.7-201ENST00000422212 1621 ntBASIC3.59□□□□□ -1.84
CLCN3P51790 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.59□□□□□ -1.84
CLCN3P51790 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
CLCN3P51790 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLCN3P51790 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLCN3P51790 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLCN3P51790 RNU6-223P-201ENST00000362830 107 ntBASIC3.58□□□□□ -1.84
CLCN3P51790 RNU6-637P-201ENST00000384050 107 ntBASIC3.58□□□□□ -1.84
CLCN3P51790 RNU6-809P-201ENST00000384461 107 ntBASIC3.58□□□□□ -1.84
CLCN3P51790 RPS20P2-201ENST00000402520 389 ntBASIC3.58□□□□□ -1.84
CLCN3P51790 Y_RNA.598-201ENST00000410480 95 ntBASIC3.58□□□□□ -1.84
CLCN3P51790 RNA5SP229-201ENST00000410809 99 ntBASIC3.58□□□□□ -1.84
CLCN3P51790 RNU4-47P-201ENST00000410876 114 ntBASIC3.58□□□□□ -1.84
CLCN3P51790 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.58□□□□□ -1.84
CLCN3P51790 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.58□□□□□ -1.84
CLCN3P51790 MTCO2P3-201ENST00000442543 421 ntBASIC3.58□□□□□ -1.84
CLCN3P51790 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.58□□□□□ -1.84
CLCN3P51790 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.58□□□□□ -1.84
CLCN3P51790 USP9YP12-201ENST00000450481 570 ntBASIC3.58□□□□□ -1.84
CLCN3P51790 AC093392.2-201ENST00000450682 337 ntBASIC3.58□□□□□ -1.84
CLCN3P51790 AL590365.1-201ENST00000450788 243 ntBASIC3.58□□□□□ -1.84
CLCN3P51790 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.58□□□□□ -1.84
CLCN3P51790 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.58□□□□□ -1.84
CLCN3P51790 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.58□□□□□ -1.84
CLCN3P51790 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLCN3P51790 AC114967.1-201ENST00000504890 259 ntBASIC3.58□□□□□ -1.84
CLCN3P51790 AC004062.1-201ENST00000509926 645 ntBASIC3.58□□□□□ -1.84
CLCN3P51790 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.58□□□□□ -1.84
CLCN3P51790 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.58□□□□□ -1.84
CLCN3P51790 RNA5SP309-201ENST00000516670 106 ntBASIC3.58□□□□□ -1.84
CLCN3P51790 HMGN1P28-201ENST00000521340 364 ntBASIC3.58□□□□□ -1.84
CLCN3P51790 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms