Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.67□□□□□ -1.66
MRE11P49959 HMGB1P6-201ENST00000569046 646 ntBASIC4.67□□□□□ -1.66
MRE11P49959 AL354984.3-201ENST00000604803 325 ntBASIC4.67□□□□□ -1.66
MRE11P49959 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.67□□□□□ -1.66
MRE11P49959 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
MRE11P49959 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.67□□□□□ -1.66
MRE11P49959 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
MRE11P49959 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
MRE11P49959 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
MRE11P49959 FRG1CP-201ENST00000358464 769 ntBASIC4.66□□□□□ -1.66
MRE11P49959 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
MRE11P49959 RNU6-223P-201ENST00000362830 107 ntBASIC4.66□□□□□ -1.66
MRE11P49959 RNY1P12-201ENST00000364251 105 ntBASIC4.66□□□□□ -1.66
MRE11P49959 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
MRE11P49959 AL354719.1-201ENST00000406535 843 ntBASIC4.66□□□□□ -1.66
MRE11P49959 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.66□□□□□ -1.66
MRE11P49959 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.66□□□□□ -1.66
MRE11P49959 AC068533.1-201ENST00000418542 415 ntBASIC4.66□□□□□ -1.66
MRE11P49959 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.66□□□□□ -1.66
MRE11P49959 ELOCP4-201ENST00000420090 333 ntBASIC4.66□□□□□ -1.66
MRE11P49959 AC008065.1-201ENST00000428525 348 ntBASIC4.66□□□□□ -1.66
MRE11P49959 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
MRE11P49959 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.66□□□□□ -1.66
MRE11P49959 AC053481.1-201ENST00000467217 306 ntBASIC4.66□□□□□ -1.66
MRE11P49959 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.66□□□□□ -1.66
MRE11P49959 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.66□□□□□ -1.66
MRE11P49959 AC117522.3-201ENST00000507974 584 ntBASIC4.66□□□□□ -1.66
MRE11P49959 AC104057.1-201ENST00000515547 497 ntBASIC4.66□□□□□ -1.66
MRE11P49959 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.66□□□□□ -1.66
MRE11P49959 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
MRE11P49959 HPRT1P3-201ENST00000539521 576 ntBASIC4.66□□□□□ -1.66
MRE11P49959 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.66□□□□□ -1.66
MRE11P49959 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.66□□□□□ -1.66
MRE11P49959 AC078814.3-201ENST00000553036 491 ntBASIC4.66□□□□□ -1.66
MRE11P49959 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.66□□□□□ -1.66
MRE11P49959 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.66□□□□□ -1.66
MRE11P49959 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.66□□□□□ -1.66
MRE11P49959 AC010928.3-201ENST00000587712 541 ntBASIC4.66□□□□□ -1.66
MRE11P49959 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.66□□□□□ -1.66
MRE11P49959 MIR6867-201ENST00000610636 67 ntBASIC4.66□□□□□ -1.66
MRE11P49959 PART1_1.1-201ENST00000611761 217 ntBASIC4.66□□□□□ -1.66
MRE11P49959 AC079597.1-201ENST00000624306 508 ntBASIC4.66□□□□□ -1.66
MRE11P49959 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
MRE11P49959 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
MRE11P49959 MTND5P28-201ENST00000438005 1594 ntBASIC4.65□□□□□ -1.66
MRE11P49959 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
MRE11P49959 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
MRE11P49959 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.66
MRE11P49959 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
MRE11P49959 RNU6-332P-201ENST00000391193 108 ntBASIC4.65□□□□□ -1.67
MRE11P49959 RN7SKP284-201ENST00000411002 343 ntBASIC4.65□□□□□ -1.67
MRE11P49959 AC069218.2-201ENST00000411665 344 ntBASIC4.65□□□□□ -1.67
MRE11P49959 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.65□□□□□ -1.67
MRE11P49959 AL354751.2-201ENST00000415471 210 ntBASIC4.65□□□□□ -1.67
MRE11P49959 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.65□□□□□ -1.67
MRE11P49959 AL356095.1-201ENST00000417217 199 ntBASIC4.65□□□□□ -1.67
MRE11P49959 RPS15AP12-201ENST00000419498 388 ntBASIC4.65□□□□□ -1.67
MRE11P49959 AC092832.1-201ENST00000422934 400 ntBASIC4.65□□□□□ -1.67
MRE11P49959 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.65□□□□□ -1.67
MRE11P49959 AC002075.2-201ENST00000425207 252 ntBASIC4.65□□□□□ -1.67
MRE11P49959 COX6CP15-201ENST00000426313 211 ntBASIC4.65□□□□□ -1.67
MRE11P49959 RPS6P12-201ENST00000432491 726 ntBASIC4.65□□□□□ -1.67
MRE11P49959 RPL23AP81-201ENST00000455252 467 ntBASIC4.65□□□□□ -1.67
MRE11P49959 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.65□□□□□ -1.67
MRE11P49959 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.65□□□□□ -1.67
MRE11P49959 PLGLA-201ENST00000465668 449 ntBASIC4.65□□□□□ -1.67
MRE11P49959 RPS29P19-201ENST00000479709 171 ntBASIC4.65□□□□□ -1.67
MRE11P49959 RPL21P103-201ENST00000479921 488 ntBASIC4.65□□□□□ -1.67
MRE11P49959 RPL23AP41-201ENST00000484754 458 ntBASIC4.65□□□□□ -1.67
MRE11P49959 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.65□□□□□ -1.67
MRE11P49959 AC093767.1-201ENST00000504523 156 ntBASIC4.65□□□□□ -1.67
MRE11P49959 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.65□□□□□ -1.67
MRE11P49959 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.65□□□□□ -1.67
MRE11P49959 RNA5SP337-201ENST00000517007 109 ntBASIC4.65□□□□□ -1.67
MRE11P49959 AP000907.2-201ENST00000530827 353 ntBASIC4.65□□□□□ -1.67
MRE11P49959 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.65□□□□□ -1.67
MRE11P49959 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.65□□□□□ -1.67
MRE11P49959 AL121576.1-201ENST00000556055 276 ntBASIC4.65□□□□□ -1.67
MRE11P49959 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.65□□□□□ -1.67
MRE11P49959 MIR5195-201ENST00000583555 115 ntBASIC4.65□□□□□ -1.67
MRE11P49959 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.65□□□□□ -1.67
MRE11P49959 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.65□□□□□ -1.67
MRE11P49959 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.65□□□□□ -1.67
MRE11P49959 AC105429.2-201ENST00000610567 517 ntBASIC4.65□□□□□ -1.67
MRE11P49959 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.65□□□□□ -1.67
MRE11P49959 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.65□□□□□ -1.67
MRE11P49959 AC100810.6-201ENST00000638068 285 ntBASIC4.65□□□□□ -1.67
MRE11P49959 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
MRE11P49959 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
MRE11P49959 AL161912.2-201ENST00000565707 3007 ntBASIC4.65□□□□□ -1.67
MRE11P49959 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.65□□□□□ -1.67
MRE11P49959 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.65□□□□□ -1.67
MRE11P49959 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
MRE11P49959 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.65□□□□□ -1.67
MRE11P49959 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.65□□□□□ -1.67
MRE11P49959 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
MRE11P49959 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
MRE11P49959 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
MRE11P49959 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
MRE11P49959 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms