Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.38□□□□□ -2.03
CSNK1A1P48729 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.38□□□□□ -2.03
CSNK1A1P48729 THAP5P1-201ENST00000439089 262 ntBASIC2.38□□□□□ -2.03
CSNK1A1P48729 AL714022.1-201ENST00000439897 151 ntBASIC2.38□□□□□ -2.03
CSNK1A1P48729 MRPL50P4-201ENST00000446432 475 ntBASIC2.38□□□□□ -2.03
CSNK1A1P48729 snoU13.28-201ENST00000459235 104 ntBASIC2.38□□□□□ -2.03
CSNK1A1P48729 AC116337.2-201ENST00000477662 156 ntBASIC2.38□□□□□ -2.03
CSNK1A1P48729 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.38□□□□□ -2.03
CSNK1A1P48729 AC116353.3-201ENST00000511215 249 ntBASIC2.38□□□□□ -2.03
CSNK1A1P48729 SUB1P1-201ENST00000524415 382 ntBASIC2.38□□□□□ -2.03
CSNK1A1P48729 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CSNK1A1P48729 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.38□□□□□ -2.03
CSNK1A1P48729 AC005832.2-201ENST00000538921 1430 ntBASIC2.38□□□□□ -2.03
CSNK1A1P48729 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.38□□□□□ -2.03
CSNK1A1P48729 AC004486.1-201ENST00000546846 233 ntBASIC2.38□□□□□ -2.03
CSNK1A1P48729 AL355836.1-201ENST00000555951 870 ntBASIC2.38□□□□□ -2.03
CSNK1A1P48729 AC090615.1-201ENST00000577519 154 ntBASIC2.38□□□□□ -2.03
CSNK1A1P48729 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.38□□□□□ -2.03
CSNK1A1P48729 MIR3670-2-201ENST00000582974 65 ntBASIC2.38□□□□□ -2.03
CSNK1A1P48729 MIR3670-1-201ENST00000584160 65 ntBASIC2.38□□□□□ -2.03
CSNK1A1P48729 MIR3670-3-201ENST00000584855 65 ntBASIC2.38□□□□□ -2.03
CSNK1A1P48729 ELOCP29-201ENST00000588193 334 ntBASIC2.38□□□□□ -2.03
CSNK1A1P48729 AC106052.1-201ENST00000608029 497 ntBASIC2.38□□□□□ -2.03
CSNK1A1P48729 MIR3670-4-201ENST00000612260 65 ntBASIC2.38□□□□□ -2.03
CSNK1A1P48729 AL590099.1-201ENST00000615276 138 ntBASIC2.38□□□□□ -2.03
CSNK1A1P48729 AC090132.2-201ENST00000615881 347 ntBASIC2.38□□□□□ -2.03
CSNK1A1P48729 SNHG22-203ENST00000617833 660 ntBASIC2.38□□□□□ -2.03
CSNK1A1P48729 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.38□□□□□ -2.03
CSNK1A1P48729 AC135776.4-201ENST00000624300 1904 ntBASIC2.38□□□□□ -2.03
CSNK1A1P48729 CR848007.1-201ENST00000442354 1699 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.37□□□□□ -2.03
CSNK1A1P48729 AL365361.1-201ENST00000566942 3481 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.37□□□□□ -2.03
CSNK1A1P48729 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CSNK1A1P48729 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CSNK1A1P48729 MIR9-1-201ENST00000385198 89 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 MIR767-201ENST00000390228 109 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.37□□□□□ -2.03
CSNK1A1P48729 AL513475.1-201ENST00000406602 315 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 MIR1284-201ENST00000408337 120 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 Z92545.1-201ENST00000411782 234 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 MTCO2P8-201ENST00000412213 658 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 Z85995.1-201ENST00000415547 335 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.37□□□□□ -2.03
CSNK1A1P48729 MTCO2P20-201ENST00000437339 673 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 MTND5P14-201ENST00000441481 1267 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 AC002381.1-201ENST00000447049 280 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 MTND1P16-201ENST00000465177 898 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 RPL30P9-201ENST00000465586 330 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 AC090525.1-201ENST00000479116 478 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 HSPE1P6-201ENST00000479457 291 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CSNK1A1P48729 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.37□□□□□ -2.03
CSNK1A1P48729 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.37□□□□□ -2.03
CSNK1A1P48729 AC097462.2-201ENST00000504623 481 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 AC113155.1-201ENST00000511141 769 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.37□□□□□ -2.03
CSNK1A1P48729 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.37□□□□□ -2.03
CSNK1A1P48729 RNU6-150P-201ENST00000516237 95 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 SCARNA15.2-201ENST00000516409 127 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.37□□□□□ -2.03
CSNK1A1P48729 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.37□□□□□ -2.03
CSNK1A1P48729 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.37□□□□□ -2.03
CSNK1A1P48729 COX6CP8-201ENST00000522620 226 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 AC079600.2-201ENST00000550076 130 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CSNK1A1P48729 AC010546.1-201ENST00000569391 485 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 MIR4446-201ENST00000578505 67 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.37□□□□□ -2.03
CSNK1A1P48729 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.37□□□□□ -2.03
CSNK1A1P48729 RPP40P2-201ENST00000603596 712 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 AP000787.2-201ENST00000604432 568 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 AC007619.2-201ENST00000605743 379 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 AL450472.3-201ENST00000615578 367 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.37□□□□□ -2.03
CSNK1A1P48729 AC079597.1-201ENST00000624306 508 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 AC006386.2-201ENST00000624491 75 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 AC012005.1-201ENST00000624575 75 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.37□□□□□ -2.03
CSNK1A1P48729 AP003399.1-201ENST00000637534 361 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 AC005539.1-201ENST00000443768 1479 ntBASIC2.37□□□□□ -2.03
CSNK1A1P48729 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.37□□□□□ -2.03
CSNK1A1P48729 AL049641.1-201ENST00000441055 1948 ntBASIC2.36□□□□□ -2.03
CSNK1A1P48729 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CSNK1A1P48729 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CSNK1A1P48729 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CSNK1A1P48729 RNU4-92P-201ENST00000363783 136 ntBASIC2.36□□□□□ -2.03
CSNK1A1P48729 RNU6-270P-201ENST00000364131 105 ntBASIC2.36□□□□□ -2.03
CSNK1A1P48729 Y_RNA.234-201ENST00000364409 97 ntBASIC2.36□□□□□ -2.03
CSNK1A1P48729 RNU6-76P-201ENST00000384060 104 ntBASIC2.36□□□□□ -2.03
CSNK1A1P48729 MIR592-201ENST00000384959 97 ntBASIC2.36□□□□□ -2.03
CSNK1A1P48729 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.36□□□□□ -2.03
CSNK1A1P48729 AC106883.1-201ENST00000418805 562 ntBASIC2.36□□□□□ -2.03
CSNK1A1P48729 AL953862.1-201ENST00000423016 168 ntBASIC2.36□□□□□ -2.03
CSNK1A1P48729 AC098614.2-201ENST00000426040 255 ntBASIC2.36□□□□□ -2.03
CSNK1A1P48729 AL358075.3-201ENST00000426289 226 ntBASIC2.36□□□□□ -2.03
CSNK1A1P48729 AL512844.2-201ENST00000433990 593 ntBASIC2.36□□□□□ -2.03
CSNK1A1P48729 USP9YP24-201ENST00000434374 697 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms