Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.19□□□□□ -1.9
NEDD4P46934 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.19□□□□□ -1.9
NEDD4P46934 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.19□□□□□ -1.9
NEDD4P46934 AP001004.1-201ENST00000582468 324 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 AC112187.2-201ENST00000604345 283 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.19□□□□□ -1.9
NEDD4P46934 LRRC77P-213ENST00000637727 880 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
NEDD4P46934 AC091152.2-201ENST00000591628 2569 ntBASIC3.18□□□□□ -1.9
NEDD4P46934 AC092435.3-201ENST00000565538 3654 ntBASIC3.18□□□□□ -1.9
NEDD4P46934 TAB3P1-202ENST00000452645 1634 ntBASIC3.18□□□□□ -1.9
NEDD4P46934 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
NEDD4P46934 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NEDD4P46934 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.18□□□□□ -1.9
NEDD4P46934 AC138915.3-201ENST00000562908 1389 ntBASIC3.18□□□□□ -1.9
NEDD4P46934 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NEDD4P46934 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NEDD4P46934 Y_RNA.234-201ENST00000364409 97 ntBASIC3.18□□□□□ -1.9
NEDD4P46934 RNU6-629P-201ENST00000384061 103 ntBASIC3.18□□□□□ -1.9
NEDD4P46934 RPS3AP26-201ENST00000398259 784 ntBASIC3.18□□□□□ -1.9
NEDD4P46934 AL031577.2-201ENST00000404133 280 ntBASIC3.18□□□□□ -1.9
NEDD4P46934 MTCO1P17-201ENST00000411522 491 ntBASIC3.18□□□□□ -1.9
NEDD4P46934 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.18□□□□□ -1.9
NEDD4P46934 USP9YP26-201ENST00000421008 661 ntBASIC3.18□□□□□ -1.9
NEDD4P46934 Z99497.1-201ENST00000421282 135 ntBASIC3.18□□□□□ -1.9
NEDD4P46934 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.18□□□□□ -1.9
NEDD4P46934 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.18□□□□□ -1.9
NEDD4P46934 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.18□□□□□ -1.9
NEDD4P46934 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.18□□□□□ -1.9
NEDD4P46934 LSM1P1-201ENST00000438629 273 ntBASIC3.18□□□□□ -1.9
NEDD4P46934 AL117351.1-201ENST00000438864 766 ntBASIC3.18□□□□□ -1.9
NEDD4P46934 AL445567.1-201ENST00000439121 144 ntBASIC3.18□□□□□ -1.9
NEDD4P46934 NPM1P49-201ENST00000448027 714 ntBASIC3.18□□□□□ -1.9
NEDD4P46934 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.18□□□□□ -1.9
NEDD4P46934 RPS24P6-201ENST00000452670 400 ntBASIC3.18□□□□□ -1.9
NEDD4P46934 Z82190.1-201ENST00000454534 490 ntBASIC3.18□□□□□ -1.9
NEDD4P46934 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NEDD4P46934 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.18□□□□□ -1.9
NEDD4P46934 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.18□□□□□ -1.9
NEDD4P46934 AP004247.1-201ENST00000531556 1289 ntBASIC3.18□□□□□ -1.9
NEDD4P46934 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.18□□□□□ -1.9
NEDD4P46934 CR383656.7-201ENST00000548164 174 ntBASIC3.18□□□□□ -1.9
NEDD4P46934 AC126177.3-201ENST00000551839 688 ntBASIC3.18□□□□□ -1.9
NEDD4P46934 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.18□□□□□ -1.9
NEDD4P46934 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.18□□□□□ -1.9
NEDD4P46934 HMGB1P6-201ENST00000569046 646 ntBASIC3.18□□□□□ -1.9
NEDD4P46934 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.18□□□□□ -1.9
NEDD4P46934 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.18□□□□□ -1.9
NEDD4P46934 AL109653.1-201ENST00000603091 248 ntBASIC3.18□□□□□ -1.9
NEDD4P46934 AL031176.1-201ENST00000604554 466 ntBASIC3.18□□□□□ -1.9
NEDD4P46934 AC097468.3-201ENST00000607956 456 ntBASIC3.18□□□□□ -1.9
NEDD4P46934 AC022079.1-201ENST00000621546 602 ntBASIC3.18□□□□□ -1.9
NEDD4P46934 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.18□□□□□ -1.9
NEDD4P46934 CR381653.2-201ENST00000624041 768 ntBASIC3.18□□□□□ -1.9
NEDD4P46934 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.18□□□□□ -1.9
NEDD4P46934 SCARNA15.3-201ENST00000626315 122 ntBASIC3.18□□□□□ -1.9
NEDD4P46934 SCARNA4.1-201ENST00000628597 123 ntBASIC3.18□□□□□ -1.9
NEDD4P46934 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
NEDD4P46934 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NEDD4P46934 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.17□□□□□ -1.9
NEDD4P46934 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
NEDD4P46934 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NEDD4P46934 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
NEDD4P46934 AL445523.1-201ENST00000451184 1362 ntBASIC3.17□□□□□ -1.9
NEDD4P46934 SNORA5B-201ENST00000363786 132 ntBASIC3.17□□□□□ -1.9
NEDD4P46934 RNU6-777P-201ENST00000364265 104 ntBASIC3.17□□□□□ -1.9
NEDD4P46934 SNORA51.2-201ENST00000364595 132 ntBASIC3.17□□□□□ -1.9
NEDD4P46934 RNU6-744P-201ENST00000365557 107 ntBASIC3.17□□□□□ -1.9
NEDD4P46934 RNU6-1316P-201ENST00000384242 108 ntBASIC3.17□□□□□ -1.9
NEDD4P46934 MIR34A-201ENST00000385130 110 ntBASIC3.17□□□□□ -1.9
NEDD4P46934 MIR9-1-201ENST00000385198 89 ntBASIC3.17□□□□□ -1.9
NEDD4P46934 AL137014.1-201ENST00000420490 1226 ntBASIC3.17□□□□□ -1.9
NEDD4P46934 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.17□□□□□ -1.9
NEDD4P46934 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.17□□□□□ -1.9
NEDD4P46934 AL138799.3-201ENST00000438968 350 ntBASIC3.17□□□□□ -1.9
NEDD4P46934 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.17□□□□□ -1.9
NEDD4P46934 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.17□□□□□ -1.9
NEDD4P46934 OR6C5P-201ENST00000452388 923 ntBASIC3.17□□□□□ -1.9
NEDD4P46934 CACYBPP2-201ENST00000453625 678 ntBASIC3.17□□□□□ -1.9
NEDD4P46934 RPL23AP31-201ENST00000456160 467 ntBASIC3.17□□□□□ -1.9
NEDD4P46934 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.17□□□□□ -1.9
NEDD4P46934 AC034222.1-201ENST00000494052 532 ntBASIC3.17□□□□□ -1.9
NEDD4P46934 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.17□□□□□ -1.9
NEDD4P46934 HMGB1P22-201ENST00000505315 124 ntBASIC3.17□□□□□ -1.9
NEDD4P46934 RNU6-714P-201ENST00000516963 103 ntBASIC3.17□□□□□ -1.9
NEDD4P46934 SNORA31.20-201ENST00000517111 133 ntBASIC3.17□□□□□ -1.9
NEDD4P46934 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.17□□□□□ -1.9
NEDD4P46934 AC109635.4-202ENST00000531666 412 ntBASIC3.17□□□□□ -1.9
NEDD4P46934 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.17□□□□□ -1.9
NEDD4P46934 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.17□□□□□ -1.9
NEDD4P46934 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NEDD4P46934 XIAPP1-201ENST00000603162 600 ntBASIC3.17□□□□□ -1.9
NEDD4P46934 AC012669.1-201ENST00000603209 283 ntBASIC3.17□□□□□ -1.9
NEDD4P46934 MTCYBP22-201ENST00000603788 447 ntBASIC3.17□□□□□ -1.9
NEDD4P46934 AC121247.2-201ENST00000604776 136 ntBASIC3.17□□□□□ -1.9
NEDD4P46934 MIR7844-201ENST00000616161 122 ntBASIC3.17□□□□□ -1.9
NEDD4P46934 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NEDD4P46934 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
NEDD4P46934 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.16□□□□□ -1.9
NEDD4P46934 AL365361.1-201ENST00000566942 3481 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms