Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC012640.5-201ENST00000623897 319 ntBASIC2.77□□□□□ -1.97
SSR1P43307 AP001002.2-201ENST00000625137 386 ntBASIC2.77□□□□□ -1.97
SSR1P43307 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.77□□□□□ -1.97
SSR1P43307 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SSR1P43307 MTND4P35-201ENST00000604257 1375 ntBASIC2.76□□□□□ -1.97
SSR1P43307 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
SSR1P43307 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SSR1P43307 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SSR1P43307 RNU5A-1-201ENST00000362698 116 ntBASIC2.76□□□□□ -1.97
SSR1P43307 MIR767-201ENST00000390228 109 ntBASIC2.76□□□□□ -1.97
SSR1P43307 AL355497.1-201ENST00000406262 551 ntBASIC2.76□□□□□ -1.97
SSR1P43307 AL592310.1-201ENST00000414330 671 ntBASIC2.76□□□□□ -1.97
SSR1P43307 USP9YP20-201ENST00000419224 558 ntBASIC2.76□□□□□ -1.97
SSR1P43307 AC099548.1-201ENST00000421443 426 ntBASIC2.76□□□□□ -1.97
SSR1P43307 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.76□□□□□ -1.97
SSR1P43307 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.76□□□□□ -1.97
SSR1P43307 DDX3P2-201ENST00000446138 111 ntBASIC2.76□□□□□ -1.97
SSR1P43307 CACYBPP2-201ENST00000453625 678 ntBASIC2.76□□□□□ -1.97
SSR1P43307 RPL18AP17-201ENST00000455326 198 ntBASIC2.76□□□□□ -1.97
SSR1P43307 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.76□□□□□ -1.97
SSR1P43307 RNU7-136P-201ENST00000458819 69 ntBASIC2.76□□□□□ -1.97
SSR1P43307 RPL30P9-201ENST00000465586 330 ntBASIC2.76□□□□□ -1.97
SSR1P43307 LARP1BP2-201ENST00000486594 519 ntBASIC2.76□□□□□ -1.97
SSR1P43307 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.76□□□□□ -1.97
SSR1P43307 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.76□□□□□ -1.97
SSR1P43307 AC107222.1-201ENST00000510899 637 ntBASIC2.76□□□□□ -1.97
SSR1P43307 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.76□□□□□ -1.97
SSR1P43307 RNU6-583P-201ENST00000516012 92 ntBASIC2.76□□□□□ -1.97
SSR1P43307 CKS1BP7-201ENST00000522230 235 ntBASIC2.76□□□□□ -1.97
SSR1P43307 COX6CP8-201ENST00000522620 226 ntBASIC2.76□□□□□ -1.97
SSR1P43307 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.76□□□□□ -1.97
SSR1P43307 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.76□□□□□ -1.97
SSR1P43307 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.76□□□□□ -1.97
SSR1P43307 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.76□□□□□ -1.97
SSR1P43307 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.76□□□□□ -1.97
SSR1P43307 AC005951.2-201ENST00000576282 495 ntBASIC2.76□□□□□ -1.97
SSR1P43307 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SSR1P43307 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.76□□□□□ -1.97
SSR1P43307 BX664608.1-201ENST00000610519 487 ntBASIC2.76□□□□□ -1.97
SSR1P43307 AC004852.3-201ENST00000614131 326 ntBASIC2.76□□□□□ -1.97
SSR1P43307 AC123767.1-202ENST00000620407 817 ntBASIC2.76□□□□□ -1.97
SSR1P43307 AP003485.1-201ENST00000625093 753 ntBASIC2.76□□□□□ -1.97
SSR1P43307 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SSR1P43307 ZNF833P-201ENST00000424938 1494 ntBASIC2.76□□□□□ -1.97
SSR1P43307 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
SSR1P43307 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.75□□□□□ -1.97
SSR1P43307 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SSR1P43307 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SSR1P43307 RNU6-28P-201ENST00000362378 107 ntBASIC2.75□□□□□ -1.97
SSR1P43307 AL356057.3-201ENST00000402607 340 ntBASIC2.75□□□□□ -1.97
SSR1P43307 RNA5SP80-201ENST00000410475 111 ntBASIC2.75□□□□□ -1.97
SSR1P43307 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.75□□□□□ -1.97
SSR1P43307 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.75□□□□□ -1.97
SSR1P43307 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.75□□□□□ -1.97
SSR1P43307 AL358075.3-201ENST00000426289 226 ntBASIC2.75□□□□□ -1.97
SSR1P43307 AC090774.1-201ENST00000435925 246 ntBASIC2.75□□□□□ -1.97
SSR1P43307 SDCBPP1-201ENST00000440192 890 ntBASIC2.75□□□□□ -1.97
SSR1P43307 CYCSP32-201ENST00000440548 321 ntBASIC2.75□□□□□ -1.97
SSR1P43307 ST13P20-201ENST00000447996 1065 ntBASIC2.75□□□□□ -1.97
SSR1P43307 AC092155.2-201ENST00000454675 477 ntBASIC2.75□□□□□ -1.97
SSR1P43307 AC087588.1-201ENST00000462203 316 ntBASIC2.75□□□□□ -1.97
SSR1P43307 AC069528.1-202ENST00000482888 637 ntBASIC2.75□□□□□ -1.97
SSR1P43307 HMGB1P36-201ENST00000487709 576 ntBASIC2.75□□□□□ -1.97
SSR1P43307 SRIP1-201ENST00000489235 288 ntBASIC2.75□□□□□ -1.97
SSR1P43307 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SSR1P43307 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SSR1P43307 AL359273.1-201ENST00000510918 627 ntBASIC2.75□□□□□ -1.97
SSR1P43307 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.75□□□□□ -1.97
SSR1P43307 RNU6-1256P-201ENST00000516539 103 ntBASIC2.75□□□□□ -1.97
SSR1P43307 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.75□□□□□ -1.97
SSR1P43307 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.75□□□□□ -1.97
SSR1P43307 AC025281.1-201ENST00000567026 265 ntBASIC2.75□□□□□ -1.97
SSR1P43307 AC007336.1-201ENST00000576365 3828 ntBASIC2.75□□□□□ -1.97
SSR1P43307 SNORD53-201ENST00000579969 78 ntBASIC2.75□□□□□ -1.97
SSR1P43307 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.75□□□□□ -1.97
SSR1P43307 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.75□□□□□ -1.97
SSR1P43307 AC007619.2-201ENST00000605743 379 ntBASIC2.75□□□□□ -1.97
SSR1P43307 RNU6-1192P-201ENST00000612197 107 ntBASIC2.75□□□□□ -1.97
SSR1P43307 AC079395.3-201ENST00000615161 484 ntBASIC2.75□□□□□ -1.97
SSR1P43307 RNU6-489P-201ENST00000618289 107 ntBASIC2.75□□□□□ -1.97
SSR1P43307 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.75□□□□□ -1.97
SSR1P43307 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.75□□□□□ -1.97
SSR1P43307 AC099654.8-201ENST00000637757 681 ntBASIC2.75□□□□□ -1.97
SSR1P43307 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SSR1P43307 AC008568.2-201ENST00000623862 2313 ntBASIC2.75□□□□□ -1.97
SSR1P43307 AC097714.1-201ENST00000511272 1647 ntBASIC2.75□□□□□ -1.97
SSR1P43307 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SSR1P43307 DEFB108F-201ENST00000344638 222 ntBASIC2.74□□□□□ -1.97
SSR1P43307 RNU1-39P-201ENST00000383897 165 ntBASIC2.74□□□□□ -1.97
SSR1P43307 RNU6-76P-201ENST00000384060 104 ntBASIC2.74□□□□□ -1.97
SSR1P43307 SNORD116-12-201ENST00000384468 92 ntBASIC2.74□□□□□ -1.97
SSR1P43307 U3.20-201ENST00000390909 217 ntBASIC2.74□□□□□ -1.97
SSR1P43307 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.74□□□□□ -1.97
SSR1P43307 DPPA3P1-201ENST00000448050 469 ntBASIC2.74□□□□□ -1.97
SSR1P43307 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.74□□□□□ -1.97
SSR1P43307 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.74□□□□□ -1.97
SSR1P43307 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.74□□□□□ -1.97
SSR1P43307 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.74□□□□□ -1.97
SSR1P43307 RNU6-528P-201ENST00000516926 100 ntBASIC2.74□□□□□ -1.97
SSR1P43307 AC091163.3-201ENST00000518269 1144 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms