Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC016877.3-201ENST00000606778 504 ntBASIC1.2□□□□□ -2.22
HTTP42858 AL031775.1-201ENST00000607014 887 ntBASIC1.2□□□□□ -2.22
HTTP42858 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.2□□□□□ -2.22
HTTP42858 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.2□□□□□ -2.22
HTTP42858 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.2□□□□□ -2.22
HTTP42858 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
HTTP42858 DPPA3P1-201ENST00000448050 469 ntBASIC1.2□□□□□ -2.22
HTTP42858 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.2□□□□□ -2.22
HTTP42858 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC1.2□□□□□ -2.22
HTTP42858 PRELID3BP4-201ENST00000515476 571 ntBASIC1.2□□□□□ -2.22
HTTP42858 AC074117.2-201ENST00000417130 397 ntBASIC1.19□□□□□ -2.22
HTTP42858 NDUFS5P3-201ENST00000450668 321 ntBASIC1.19□□□□□ -2.22
HTTP42858 CFTRP1-201ENST00000456646 183 ntBASIC1.19□□□□□ -2.22
HTTP42858 RPL30P6-201ENST00000475925 342 ntBASIC1.19□□□□□ -2.22
HTTP42858 TRAV31-201ENST00000502780 342 ntBASIC1.19□□□□□ -2.22
HTTP42858 AL161713.1-201ENST00000555538 145 ntBASIC1.19□□□□□ -2.22
HTTP42858 AC108706.1-201ENST00000611053 297 ntBASIC1.19□□□□□ -2.22
HTTP42858 AP001005.3-201ENST00000622049 129 ntBASIC1.19□□□□□ -2.22
HTTP42858 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.19□□□□□ -2.22
HTTP42858 CNOT6LP1-201ENST00000559681 1462 ntBASIC1.19□□□□□ -2.22
HTTP42858 Y_RNA.518-201ENST00000384552 113 ntBASIC1.19□□□□□ -2.22
HTTP42858 AL512504.1-201ENST00000415494 778 ntBASIC1.19□□□□□ -2.22
HTTP42858 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.19□□□□□ -2.22
HTTP42858 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.19□□□□□ -2.22
HTTP42858 MTND4P31-201ENST00000425607 1343 ntBASIC1.19□□□□□ -2.22
HTTP42858 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
HTTP42858 AC007390.1-201ENST00000415722 356 ntBASIC1.18□□□□□ -2.22
HTTP42858 MTCYBP37-201ENST00000510642 1133 ntBASIC1.18□□□□□ -2.22
HTTP42858 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC1.18□□□□□ -2.22
HTTP42858 AC016590.3-201ENST00000611171 753 ntBASIC1.18□□□□□ -2.22
HTTP42858 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC1.18□□□□□ -2.22
HTTP42858 SNRPEP3-201ENST00000338402 276 ntBASIC1.18□□□□□ -2.22
HTTP42858 DEFB108F-201ENST00000344638 222 ntBASIC1.18□□□□□ -2.22
HTTP42858 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.18□□□□□ -2.22
HTTP42858 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
HTTP42858 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
HTTP42858 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.18□□□□□ -2.22
HTTP42858 AC097655.1-201ENST00000635075 318 ntBASIC1.18□□□□□ -2.22
HTTP42858 PSMA2P3-201ENST00000429685 675 ntBASIC1.18□□□□□ -2.22
HTTP42858 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.18□□□□□ -2.22
HTTP42858 AC089999.1-201ENST00000460336 374 ntBASIC1.18□□□□□ -2.22
HTTP42858 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.18□□□□□ -2.22
HTTP42858 AP003499.2-201ENST00000624100 483 ntBASIC1.18□□□□□ -2.22
HTTP42858 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HTTP42858 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HTTP42858 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.17□□□□□ -2.22
HTTP42858 RNU11-2P-201ENST00000516898 142 ntBASIC1.17□□□□□ -2.22
HTTP42858 DEFB108E-201ENST00000524692 240 ntBASIC1.17□□□□□ -2.22
HTTP42858 MIR6513-201ENST00000621188 64 ntBASIC1.17□□□□□ -2.22
HTTP42858 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
HTTP42858 CUL4AP1-201ENST00000514750 1863 ntBASIC1.17□□□□□ -2.22
HTTP42858 MIR1197-201ENST00000408818 88 ntBASIC1.17□□□□□ -2.22
HTTP42858 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.17□□□□□ -2.22
HTTP42858 SNORA31.16-201ENST00000516773 139 ntBASIC1.17□□□□□ -2.22
HTTP42858 AC103833.1-201ENST00000517442 172 ntBASIC1.17□□□□□ -2.22
HTTP42858 AC024619.4-201ENST00000580924 316 ntBASIC1.17□□□□□ -2.22
HTTP42858 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HTTP42858 RNU6-670P-201ENST00000364312 104 ntBASIC1.16□□□□□ -2.22
HTTP42858 RNU4-38P-201ENST00000364472 129 ntBASIC1.16□□□□□ -2.22
HTTP42858 RNA5SP331-201ENST00000364986 107 ntBASIC1.16□□□□□ -2.22
HTTP42858 AC004941.2-201ENST00000427009 228 ntBASIC1.16□□□□□ -2.22
HTTP42858 FO393415.2-201ENST00000480085 343 ntBASIC1.16□□□□□ -2.22
HTTP42858 AC114786.4-201ENST00000508771 728 ntBASIC1.16□□□□□ -2.22
HTTP42858 AC114797.1-201ENST00000514003 728 ntBASIC1.16□□□□□ -2.22
HTTP42858 IMMP1LP2-201ENST00000552954 492 ntBASIC1.16□□□□□ -2.22
HTTP42858 MIR4714-201ENST00000580728 77 ntBASIC1.16□□□□□ -2.22
HTTP42858 MIR8087-201ENST00000612745 78 ntBASIC1.16□□□□□ -2.22
HTTP42858 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
HTTP42858 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
HTTP42858 OR5AQ1P-202ENST00000641257 1534 ntBASIC1.16□□□□□ -2.22
HTTP42858 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
HTTP42858 VTRNA1-1-201ENST00000363120 99 ntBASIC1.16□□□□□ -2.22
HTTP42858 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.16□□□□□ -2.22
HTTP42858 AC093852.1-201ENST00000503587 266 ntBASIC1.16□□□□□ -2.22
HTTP42858 AC093752.1-206ENST00000511823 336 ntBASIC1.16□□□□□ -2.22
HTTP42858 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
HTTP42858 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.15□□□□□ -2.22
HTTP42858 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC1.15□□□□□ -2.22
HTTP42858 RPL30P12-201ENST00000474666 353 ntBASIC1.15□□□□□ -2.22
HTTP42858 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
HTTP42858 AC130650.2-201ENST00000618736 2403 ntBASIC1.15□□□□□ -2.23
HTTP42858 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.15□□□□□ -2.23
HTTP42858 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.15□□□□□ -2.23
HTTP42858 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.15□□□□□ -2.23
HTTP42858 AC123912.3-201ENST00000600907 1367 ntBASIC1.15□□□□□ -2.23
HTTP42858 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.23
HTTP42858 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
HTTP42858 AC099548.1-201ENST00000421443 426 ntBASIC1.15□□□□□ -2.23
HTTP42858 CR848007.2-201ENST00000424918 787 ntBASIC1.15□□□□□ -2.23
HTTP42858 DPPA2P1-201ENST00000428060 556 ntBASIC1.15□□□□□ -2.23
HTTP42858 AC234064.1-201ENST00000436312 247 ntBASIC1.15□□□□□ -2.23
HTTP42858 AP003072.2-201ENST00000527756 676 ntBASIC1.15□□□□□ -2.23
HTTP42858 CBX3P7-201ENST00000532876 502 ntBASIC1.15□□□□□ -2.23
HTTP42858 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.15□□□□□ -2.23
HTTP42858 MIR4295-201ENST00000585286 85 ntBASIC1.15□□□□□ -2.23
HTTP42858 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.15□□□□□ -2.23
HTTP42858 RNU6-105P-201ENST00000363909 104 ntBASIC1.14□□□□□ -2.23
HTTP42858 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
HTTP42858 HMGB1P49-201ENST00000418882 569 ntBASIC1.14□□□□□ -2.23
HTTP42858 RPL7P34-201ENST00000433316 712 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms