Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.32□□□□□ -2.2
SNCAP37840 AF131215.7-201ENST00000602443 707 ntBASIC1.32□□□□□ -2.2
SNCAP37840 MIR502-201ENST00000606349 86 ntBASIC1.32□□□□□ -2.2
SNCAP37840 uc_338.5-201ENST00000611839 155 ntBASIC1.32□□□□□ -2.2
SNCAP37840 AC003001.2-201ENST00000616294 831 ntBASIC1.32□□□□□ -2.2
SNCAP37840 AL356118.1-201ENST00000635272 1078 ntBASIC1.32□□□□□ -2.2
SNCAP37840 MIR7515-201ENST00000637837 67 ntBASIC1.32□□□□□ -2.2
SNCAP37840 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SNCAP37840 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.32□□□□□ -2.2
SNCAP37840 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.32□□□□□ -2.2
SNCAP37840 MTND5P10-201ENST00000603719 1809 ntBASIC1.31□□□□□ -2.2
SNCAP37840 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SNCAP37840 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.31□□□□□ -2.2
SNCAP37840 Y_RNA.111-201ENST00000363248 100 ntBASIC1.31□□□□□ -2.2
SNCAP37840 Y_RNA.500-201ENST00000384466 111 ntBASIC1.31□□□□□ -2.2
SNCAP37840 RNU6-220P-201ENST00000390919 107 ntBASIC1.31□□□□□ -2.2
SNCAP37840 AL161449.1-201ENST00000414531 1199 ntBASIC1.31□□□□□ -2.2
SNCAP37840 EIF4EP4-201ENST00000424916 578 ntBASIC1.31□□□□□ -2.2
SNCAP37840 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.31□□□□□ -2.2
SNCAP37840 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.31□□□□□ -2.2
SNCAP37840 AC236972.1-201ENST00000433225 199 ntBASIC1.31□□□□□ -2.2
SNCAP37840 AC004383.1-201ENST00000438135 289 ntBASIC1.31□□□□□ -2.2
SNCAP37840 AC016691.1-201ENST00000441321 413 ntBASIC1.31□□□□□ -2.2
SNCAP37840 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.31□□□□□ -2.2
SNCAP37840 AC023512.1-201ENST00000444513 499 ntBASIC1.31□□□□□ -2.2
SNCAP37840 RPL23AP3-201ENST00000453844 468 ntBASIC1.31□□□□□ -2.2
SNCAP37840 RPL31P53-201ENST00000457065 348 ntBASIC1.31□□□□□ -2.2
SNCAP37840 SNORD121B-201ENST00000458838 81 ntBASIC1.31□□□□□ -2.2
SNCAP37840 RNU7-23P-201ENST00000459465 62 ntBASIC1.31□□□□□ -2.2
SNCAP37840 AC087884.1-201ENST00000469738 328 ntBASIC1.31□□□□□ -2.2
SNCAP37840 AC068587.2-201ENST00000478386 781 ntBASIC1.31□□□□□ -2.2
SNCAP37840 TRBV12-1-201ENST00000479785 344 ntBASIC1.31□□□□□ -2.2
SNCAP37840 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.31□□□□□ -2.2
SNCAP37840 RPL23AP63-201ENST00000498752 471 ntBASIC1.31□□□□□ -2.2
SNCAP37840 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.31□□□□□ -2.2
SNCAP37840 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.31□□□□□ -2.2
SNCAP37840 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.31□□□□□ -2.2
SNCAP37840 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.31□□□□□ -2.2
SNCAP37840 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.31□□□□□ -2.2
SNCAP37840 AC084851.1-201ENST00000529105 249 ntBASIC1.31□□□□□ -2.2
SNCAP37840 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.31□□□□□ -2.2
SNCAP37840 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.31□□□□□ -2.2
SNCAP37840 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.31□□□□□ -2.2
SNCAP37840 DPRXP5-201ENST00000604662 539 ntBASIC1.31□□□□□ -2.2
SNCAP37840 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.31□□□□□ -2.2
SNCAP37840 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.31□□□□□ -2.2
SNCAP37840 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.31□□□□□ -2.2
SNCAP37840 OR4G2P-202ENST00000641004 1759 ntBASIC1.31□□□□□ -2.2
SNCAP37840 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.3□□□□□ -2.2
SNCAP37840 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
SNCAP37840 RNA5SP270-201ENST00000411361 118 ntBASIC1.3□□□□□ -2.2
SNCAP37840 RN7SKP101-201ENST00000411376 320 ntBASIC1.3□□□□□ -2.2
SNCAP37840 AL133384.1-201ENST00000412744 351 ntBASIC1.3□□□□□ -2.2
SNCAP37840 Z85995.1-201ENST00000415547 335 ntBASIC1.3□□□□□ -2.2
SNCAP37840 AC074117.2-201ENST00000417130 397 ntBASIC1.3□□□□□ -2.2
SNCAP37840 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.3□□□□□ -2.2
SNCAP37840 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.3□□□□□ -2.2
SNCAP37840 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.3□□□□□ -2.2
SNCAP37840 AL353689.1-201ENST00000438895 199 ntBASIC1.3□□□□□ -2.2
SNCAP37840 snoU109.1-201ENST00000459339 135 ntBASIC1.3□□□□□ -2.2
SNCAP37840 FO393415.2-201ENST00000480085 343 ntBASIC1.3□□□□□ -2.2
SNCAP37840 AC011352.3-201ENST00000505162 593 ntBASIC1.3□□□□□ -2.2
SNCAP37840 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.3□□□□□ -2.2
SNCAP37840 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.3□□□□□ -2.2
SNCAP37840 AC091544.4-201ENST00000555268 342 ntBASIC1.3□□□□□ -2.2
SNCAP37840 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SNCAP37840 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.3□□□□□ -2.2
SNCAP37840 AC005498.1-201ENST00000592125 465 ntBASIC1.3□□□□□ -2.2
SNCAP37840 AC005034.5-201ENST00000604219 466 ntBASIC1.3□□□□□ -2.2
SNCAP37840 BNIP3P19-201ENST00000605397 577 ntBASIC1.3□□□□□ -2.2
SNCAP37840 AC106052.1-201ENST00000608029 497 ntBASIC1.3□□□□□ -2.2
SNCAP37840 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.3□□□□□ -2.2
SNCAP37840 HPVC1-201ENST00000629899 1198 ntBASIC1.3□□□□□ -2.2
SNCAP37840 AC130650.2-201ENST00000618736 2403 ntBASIC1.3□□□□□ -2.2
SNCAP37840 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.3□□□□□ -2.2
SNCAP37840 ZNF876P-202ENST00000398732 1485 ntBASIC1.3□□□□□ -2.2
SNCAP37840 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SNCAP37840 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SNCAP37840 AC080128.1-201ENST00000474389 1917 ntBASIC1.29□□□□□ -2.2
SNCAP37840 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SNCAP37840 RNU6-989P-201ENST00000362756 107 ntBASIC1.29□□□□□ -2.2
SNCAP37840 MIR320A-201ENST00000385302 82 ntBASIC1.29□□□□□ -2.2
SNCAP37840 CISD1P1-201ENST00000393907 327 ntBASIC1.29□□□□□ -2.2
SNCAP37840 AL356432.1-201ENST00000405809 419 ntBASIC1.29□□□□□ -2.2
SNCAP37840 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.29□□□□□ -2.2
SNCAP37840 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC1.29□□□□□ -2.2
SNCAP37840 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.29□□□□□ -2.2
SNCAP37840 DYNLL1P5-201ENST00000467158 270 ntBASIC1.29□□□□□ -2.2
SNCAP37840 AC140059.1-201ENST00000489238 361 ntBASIC1.29□□□□□ -2.2
SNCAP37840 RPS29P21-201ENST00000496272 170 ntBASIC1.29□□□□□ -2.2
SNCAP37840 AC118465.1-201ENST00000513820 1271 ntBASIC1.29□□□□□ -2.2
SNCAP37840 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.29□□□□□ -2.2
SNCAP37840 SNORA70.16-201ENST00000516390 95 ntBASIC1.29□□□□□ -2.2
SNCAP37840 SCARNA11.3-201ENST00000517276 130 ntBASIC1.29□□□□□ -2.2
SNCAP37840 AP004607.1-201ENST00000524456 203 ntBASIC1.29□□□□□ -2.2
SNCAP37840 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.29□□□□□ -2.2
SNCAP37840 CBX3P7-201ENST00000532876 502 ntBASIC1.29□□□□□ -2.2
SNCAP37840 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.29□□□□□ -2.2
SNCAP37840 YWHAZP1-201ENST00000556286 722 ntBASIC1.29□□□□□ -2.2
SNCAP37840 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms